RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MOCOSQ96EN8 888 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 C19orf60Q96EN9 201 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 MGME1Q9BQP7 344 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 CNPY3Q9BT09 278 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 GPATCH2LQ9NWQ4 482 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 ADAM22Q9P0K1 906 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 MAP10Q9P2G4 905 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 AP4E1Q9UPM8 1137 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 SLC30A1Q9Y6M5 507 aa10.81□□□□□ -0.68
DDX41-216ENST00000513562 PRRC2CQ9Y520 2896 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 EIF3CLB5ME19 914 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 KRT86O43790 486 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RASSF9O75901 435 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 GFPT2O94808 682 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ASMTLO95671 621 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PEX11BO96011 259 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ATP1A1P05023 1023 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 CALB1P05937 261 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PRF1P14222 555 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ZNF30P17039 623 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 TYRP1P17643 537 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 CTPS1P17812 591 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ERCC2P18074 760 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 CAPZBP47756 277 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RPL7AP62424 266 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 PTSQ03393 145 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 CA9Q16790 459 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RALGPS1Q5JS13 557 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PPP1R15BQ5SWA1 713 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ARMC12Q5T9G4 340 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 DNAJC24Q6P3W2 148 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 CYB5D1Q6P9G0 228 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 TMEM26Q6ZUK4 368 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RFX8Q6ZV50 586 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 MON1BQ7L1V2 547 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PHF13Q86YI8 300 aaPredicted RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 PHYKPLQ8IUZ5 450 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 TP53INP2Q8IXH6 220 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RHOT1Q8IXI2 618 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RBMXL3Q8N7X1 1067 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 FDCSPQ8NFU4 85 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PIH1D2Q8WWB5 315 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 FCRL4Q96PJ5 515 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PLEKHG4BQ96PX9 1271 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 PCDHB18PQ96TA0 734 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 EIF3CQ99613 913 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 RIOK2Q9BVS4 552 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 MFRPQ9BY79 579 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RMI1Q9H9A7 625 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 AKIRIN1Q9H9L7 192 aaPredicted RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 CNOT6Q9ULM6 557 aaKnown RBP10.8□□□□□ -0.68
DDX41-216ENST00000513562 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 ADGRG4Q8IZF6 3080 aa10.8□□□□□ -0.68
DDX41-216ENST00000513562 RP1L1Q8IWN7 2480 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 ANKRD62A6NC57 917 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 HNRNPRO43390 633 aaKnown RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 KIF1CO43896 1103 aaKnown RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 FZD6O60353 706 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 PRKCSHP14314 528 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 AMD1P17707 334 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 NELFEP18615 380 aaKnown RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 XRCC1P18887 633 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 LPOP22079 712 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 PTGIRP43119 386 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 CLCNKAP51800 687 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 STC1P52823 247 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 PWWP2BQ6NUJ5 590 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 FAM199XQ6PEV8 388 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 ADAMTS17Q8TE56 1095 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 RSC1A1Q92681 617 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 SNRNP40Q96DI7 357 aaKnown RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 SMIM14Q96QK8 99 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 TUBGCP2Q9BSJ2 902 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 NUDT9Q9BW91 350 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 VPS16Q9H269 839 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 DHX35Q9H5Z1 703 aaKnown RBP10.79□□□□□ -0.68
DDX41-216ENST00000513562 PDE7BQ9NP56 450 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 CACNA1DQ01668 2161 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 C2CD3Q4AC94 2353 aa10.79□□□□□ -0.68
DDX41-216ENST00000513562 ANKUB1A6NFN9 424 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 DAPK3O43293 454 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 PDHA1P08559 390 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 JAM2P57087 298 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 MAXP61244 160 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 RPS15P62841 145 aaKnown RBP10.78□□□□□ -0.68
DDX41-216ENST00000513562 OGDHQ02218 1023 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 TUBB3Q13509 450 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 CACHD1Q5VU97 1274 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 RAVER1Q8IY67 606 aaKnown RBP10.78□□□□□ -0.68
DDX41-216ENST00000513562 IQCKQ8N0W5 287 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 WDR24Q96S15 920 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 CARD9Q9H257 536 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 GANQ9H2C0 597 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms