RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ARHGAP12Q8IWW6 846 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 NSMCE1Q8WV22 266 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 ZDHHC12Q96GR4 267 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 COX14Q96I36 57 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 FCRL4Q96PJ5 515 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 MCCC1Q96RQ3 725 aaPredicted RBP12.41□□□□□ -0.42
DDX41-215ENST00000512431 VPS16Q9H269 839 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 NOCTQ9UK39 431 aaKnown RBP12.41□□□□□ -0.42
DDX41-215ENST00000512431 RARRES3Q9UL19 164 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 AP4E1Q9UPM8 1137 aa12.41□□□□□ -0.42
DDX41-215ENST00000512431 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
DDX41-215ENST00000512431 LRBAP50851 2863 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 DNAJC6O75061 913 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 PGLSO95336 258 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 UNGP13051 313 aaPredicted RBP12.4□□□□□ -0.42
DDX41-215ENST00000512431 ZNF30P17039 623 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 TNFAIP3P21580 790 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 EPHB1P54762 984 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RPS18P62269 152 aaKnown RBP12.4□□□□□ -0.42
DDX41-215ENST00000512431 TRAF2Q12933 501 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 PTP4A2Q12974 167 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RALGPS1Q5JS13 557 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 LRRC66Q68CR7 880 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 SLC6A19Q695T7 634 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 DCUN1D2Q6PH85 259 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RFLNAQ6ZTI6 216 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 TMEM26Q6ZUK4 368 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 BPHLQ86WA6 291 aaPredicted RBP12.4□□□□□ -0.42
DDX41-215ENST00000512431 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 Q8NA96 180 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 MCEEQ96PE7 176 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RIOK2Q9BVS4 552 aaKnown RBP12.4□□□□□ -0.42
DDX41-215ENST00000512431 OSGEPL1Q9H4B0 414 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 RUBCNLQ9H714 662 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 GPATCH2LQ9NWQ4 482 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 OGFRQ9NZT2 677 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 PPIL1Q9Y3C6 166 aa12.4□□□□□ -0.42
DDX41-215ENST00000512431 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.43
DDX41-215ENST00000512431 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 ANKUB1A6NFN9 424 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 KRT86O43790 486 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 CBX6O95503 412 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 CHRNB2P17787 502 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 XRCC1P18887 633 aaPredicted RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 LPOP22079 712 aaPredicted RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 UBE2IP63279 158 aaKnown RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 PTSQ03393 145 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 TUBB3Q13509 450 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 PTPRRQ15256 657 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 SIDT2Q8NBJ9 832 aaKnown RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 FDCSPQ8NFU4 85 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 KLHL6Q8WZ60 621 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 SNRNP40Q96DI7 357 aaKnown RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 GPR83Q9NYM4 423 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 TNRC6AQ8NDV7 1962 aaKnown RBP12.39□□□□□ -0.43
DDX41-215ENST00000512431 CENPEQ02224 2701 aa12.39□□□□□ -0.43
DDX41-215ENST00000512431 ZNF106Q9H2Y7 1883 aaKnown RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 MED13Q9UHV7 2174 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 ARHGAP10A1A4S6 786 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 ZNF185O15231 689 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 GRID2O43424 1007 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 CEACAM4O75871 244 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 TMEM63AO94886 807 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 NELFEP18615 380 aaKnown RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 SOX5P35711 763 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 PTGIRP43119 386 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 ARL4DP49703 201 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 CLCNKAP51800 687 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 ZNF135P52742 658 aaPredicted RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 PER3P56645 1201 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 RPL7AP62424 266 aaKnown RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 ACY1Q03154 408 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 IL10RAQ13651 578 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 MARC1Q5VT66 337 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 PWWP2BQ6NUJ5 590 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 IRGCQ6NXR0 463 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 FAM92BQ6ZTR7 304 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 RAVER1Q8IY67 606 aaKnown RBP12.38□□□□□ -0.43
DDX41-215ENST00000512431 AOPEPQ8N6M6 819 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 NPWQ8N729 165 aa12.38□□□□□ -0.43
DDX41-215ENST00000512431 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms