RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 SYCP2LQ5T4T6 812 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 IZUMO3Q5VZ72 239 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 KCTD11Q693B1 232 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 DPPA4Q7L190 304 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 PCGF5Q86SE9 256 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 C11orf74Q86VG3 221 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 MMGT1Q8N4V1 131 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 SLC25A41Q8N5S1 370 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 OR2T34Q8NGX1 318 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 CXorf40AQ8TE69 158 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 PIH1D2Q8WWB5 315 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 RLN3Q8WXF3 142 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 FAM131CQ96AQ9 280 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 TOE1Q96GM8 510 aaKnown RBP9.43□□□□□ -0.9
SNF8-211ENST00000512243 DPH2Q9BQC3 489 aaPredicted RBP9.43□□□□□ -0.9
SNF8-211ENST00000512243 APOL2Q9BQE5 337 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 TRIM31Q9BZY9 425 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 PREBQ9HCU5 417 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 B4GALT6Q9UBX8 382 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 ITM2BQ9Y287 266 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 UTP11Q9Y3A2 253 aaKnown RBP9.43□□□□□ -0.9
SNF8-211ENST00000512243 FADS3Q9Y5Q0 445 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 SNX11Q9Y5W9 270 aa9.43□□□□□ -0.9
SNF8-211ENST00000512243 A0A0J9YYE9 177 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 LOC285095A0A1B0GVY8 99 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 FAM47DPA6NHR8 397 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 ANKRD66B4E2M5 251 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 AREL1O15033 823 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 TSPAN6O43657 245 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 USP12O75317 370 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 RPP40O75818 363 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 SUN1O94901 812 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 PCDH8O95206 1070 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 AGTP01019 485 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 TRBC1P01850 177 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 ATXN1LP0C7T5 689 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 ELFN1P0C7U0 828 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 ACSL1P33121 698 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 MAGEA6P43360 314 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 TAS2R38P59533 333 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 FAM193AP78312 1265 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 MRPS25P82663 173 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 SARNPP82979 210 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 RPL6Q02878 288 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 OLIG2Q13516 323 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 ARHGEF7Q14155 803 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 KIAA1161Q6NSJ0 714 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 ZC3H14Q6PJT7 736 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 CEP68Q76N32 757 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 PPIL6Q8IXY8 311 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 DNAAF3Q8N9W5 541 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 NOA1Q8NC60 698 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 GAB3Q8WWW8 586 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 CPT1BQ92523 772 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 SNF8Q96H20 258 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 MCCC1Q96RQ3 725 aaPredicted RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 SRPK1Q96SB4 655 aaKnown RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 GPR174Q9BXC1 333 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 WSB2Q9NYS7 404 aaPredicted RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 MBD1Q9UIS9 605 aaPredicted RBP9.42□□□□□ -0.9
SNF8-211ENST00000512243 GGT7Q9UJ14 662 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 INVSQ9Y283 1065 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 PPIL1Q9Y3C6 166 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 PCDHGA2Q9Y5H1 932 aa9.42□□□□□ -0.9
SNF8-211ENST00000512243 VPS13AQ96RL7 3174 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 CACNA1EQ15878 2313 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3DA0A087WVF3 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3IA0A087WXS9 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3EA0A087X179 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3KA0A087X1G2 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 C1orf232A0A0U1RR37 186 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3FA6NER0 549 aaPredicted RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 NPIPB15A6NHN6 443 aaPredicted RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 MEI4A8MW99 385 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3LB9A6J9 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 AP3B1O00203 1094 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TMEM63AO94886 807 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 SEC31AO94979 1220 aaKnown RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 HEXIM1O94992 359 aaKnown RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 SLC4A1P02730 911 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 ALPIP09923 528 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3HP0C7X1 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 PIRTP0C851 137 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 ZNF30P17039 623 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 BCKDHBP21953 392 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 CNR2P34972 360 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 RPS21P63220 83 aaKnown RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 CDH17Q12864 832 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 RALGDSQ12967 914 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 CALCOCO2Q13137 446 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 CNGA3Q16281 694 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TMEM52BQ4KMG9 183 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 GLE1Q53GS7 698 aaKnown RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 RNASEH2BQ5TBB1 312 aaKnown RBP9.41□□□□□ -0.9
SNF8-211ENST00000512243 ANKRD22Q5VYY1 191 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 KIAA0895LQ68EN5 471 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3GQ6DHY5 549 aa9.41□□□□□ -0.9
SNF8-211ENST00000512243 TBC1D3CQ6IPX1 549 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms