RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 VPS18Q9P253 973 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 C5AR2Q9P296 337 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 FZD10Q9ULW2 581 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 PCDHGC4Q9Y5F7 938 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 CROCCQ5TZA2 2017 aa11.43□□□□□ -0.58
RNF4-216ENST00000511859 FAM170AA1A519 330 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 DNAJC6O75061 913 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 RASSF9O75901 435 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 UBXN7O94888 489 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 XRCC1P18887 633 aaPredicted RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 PTMSP20962 102 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 LHCGRP22888 699 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 RFC1P35251 1148 aaPredicted RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 PDE1BQ01064 536 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 IL10RBQ08334 325 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 ZXDCQ2QGD7 858 aaPredicted RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 MED25Q71SY5 747 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 PRSS42Q7Z5A4 293 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 CISD2Q8N5K1 135 aaKnown RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 TMEM102Q8N9M5 508 aaPredicted RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 ZDHHC12Q96GR4 267 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 COX14Q96I36 57 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 CELF6Q96J87 481 aaKnown RBP11.42□□□□□ -0.58
RNF4-216ENST00000511859 NUDT9Q9BW91 350 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 ABCG8Q9H221 673 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 SP110Q9HB58 689 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 GPR83Q9NYM4 423 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 OGFRQ9NZT2 677 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 RARRES3Q9UL19 164 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 PPIL1Q9Y3C6 166 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
RNF4-216ENST00000511859 NPIPB15A6NHN6 443 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 SNX2O60749 519 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TMEM63AO94886 807 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 CPP00450 1065 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 MMEP08473 750 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TYRP1P17643 537 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 NELFEP18615 380 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 GPD1P21695 349 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ITGA3P26006 1051 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 HSPA9P38646 679 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 PTGIRP43119 386 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TPI1P60174 286 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 RPS18P62269 152 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 UBE2IP63279 158 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 IL10RAQ13651 578 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 LAMB3Q13751 1172 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ZRSR2Q15696 482 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 CCDC183Q5T5S1 534 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TMCO4Q5TGY1 634 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 CACHD1Q5VU97 1274 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 FAM199XQ6PEV8 388 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 TMEM26Q6ZUK4 368 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 USP45Q70EL2 814 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ZNF765Q7L2R6 523 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 NOP9Q86U38 636 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 TRIM74Q86UV6 250 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 RAVER1Q8IY67 606 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 GLIS1Q8NBF1 620 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 PLEKHG4BQ96PX9 1271 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 MCCC1Q96RQ3 725 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 RANBP9Q96S59 729 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 BARD1Q99728 777 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 AKIRIN1Q9H9L7 192 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 KIAA1468Q9P260 1216 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 CD84Q9UIB8 345 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 KCNK6Q9Y257 313 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 B3GNT3Q9Y2A9 372 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ZNF185O15231 689 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TIAF1O95411 115 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 VIPP01282 170 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 CLCNKAP51800 687 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 RRADP55042 308 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 PTSQ03393 145 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 LBRQ14739 615 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 RALGPS1Q5JS13 557 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 IZUMO3Q5VZ72 239 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 PWWP2BQ6NUJ5 590 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 WDR59Q6PJI9 974 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 TSPAN33Q86UF1 283 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ARFGAP1Q8N6T3 406 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ADAMTS17Q8TE56 1095 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 FNIP1Q8TF40 1166 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 SCAMP4Q969E2 229 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 ZNF599Q96NL3 588 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 NUDCD1Q96RS6 583 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 RUFY1Q96T51 708 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 SELENOOQ9BVL4 669 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 RAB33BQ9H082 229 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 EPHA6Q9UF33 1036 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
RNF4-216ENST00000511859 COPG1Q9Y678 874 aaKnown RBP11.41□□□□□ -0.58
RNF4-216ENST00000511859 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 EIF3CLB5ME19 914 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms