RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TAB3Q8N5C8 712 aaPredicted RBP13.16□□□□□ -0.3
RNF4-215ENST00000511843 UBL4BQ8N7F7 174 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 NAF1Q96HR8 494 aaKnown RBP13.16□□□□□ -0.3
RNF4-215ENST00000511843 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 FSD1LQ9BXM9 530 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 VPS18Q9P253 973 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 TMPRSS11EQ9UL52 423 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 RGSL1A5PLK6 1076 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 RHPN2P1A8MT19 583 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
RNF4-215ENST00000511843 B4GAT1O43505 415 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 SLC25A14O95258 325 aaPredicted RBP13.15□□□□□ -0.3
RNF4-215ENST00000511843 HGFP14210 728 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ALDH4A1P30038 563 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 GEMP55040 296 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 GSDMDP57764 484 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 MPP3Q13368 585 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 TBC1D25Q3MII6 688 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ATP13A5Q4VNC0 1218 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ITPRIPL1Q6GPH6 555 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 FAM151BQ6UXP7 276 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 C17orf82Q86X59 251 aaPredicted RBP13.15□□□□□ -0.3
RNF4-215ENST00000511843 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 TRAM1L1Q8N609 369 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 FAM71DQ8N9W8 422 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 OR6C4Q8NGE1 309 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 GLYATL1Q969I3 302 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 POLR1BQ9H9Y6 1135 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
RNF4-215ENST00000511843 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
RNF4-215ENST00000511843 CHD6Q8TD26 2715 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 PPM1DO15297 605 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 GRID2O43424 1007 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 NUDT21O43809 227 aaKnown RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 NUAK1O60285 661 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A9O60656 530 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 SNX2O60749 519 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 STK10O94804 968 aaKnown RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 EPOP01588 193 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A6P19224 532 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 HLA-DPA1P20036 260 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A1P22309 533 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A4P22310 534 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A3P35503 534 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A5P35504 534 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 HMGCLP35914 325 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 EIF2S3P41091 472 aaKnown RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 LSSP48449 732 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 GDF10P55107 478 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 B4GALNT1Q00973 533 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 KLF1Q13351 362 aaPredicted RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 CHRNA6Q15825 494 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 PHYKPLQ8IUZ5 450 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 SLC37A2Q8TED4 501 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
RNF4-215ENST00000511843 SPATA13Q96N96 652 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 NUDT22Q9BRQ3 303 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 IL26Q9NPH9 171 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 LZTFL1Q9NQ48 299 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 IL17CQ9P0M4 197 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 TBC1D29Q9UFV1 150 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 KCTD3Q9Y597 815 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 ARL5AQ9Y689 179 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 LAMA5O15230 3695 aa13.14□□□□□ -0.31
RNF4-215ENST00000511843 A0A087WV48 116 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 CCDC187A0A096LP49 1063 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 GAPDHSO14556 408 aaPredicted RBP13.13□□□□□ -0.31
RNF4-215ENST00000511843 ANXA9O76027 345 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 PNLIPP16233 465 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 ADRA1AP35348 466 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 ACTN2P35609 894 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 INHBCP55103 352 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 BIRC2Q13490 618 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 LRP8Q14114 963 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
RNF4-215ENST00000511843 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 FGF11Q92914 225 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 CARD9Q9H257 536 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms