RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LRRC40Q9H9A6 602 aa13.84□□□□□ -0.19
DDX41-212ENST00000511040 UGT1A7Q9HAW7 530 aa13.84□□□□□ -0.19
DDX41-212ENST00000511040 UGT1A10Q9HAW8 530 aa13.84□□□□□ -0.19
DDX41-212ENST00000511040 UGT1A8Q9HAW9 530 aa13.84□□□□□ -0.19
DDX41-212ENST00000511040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX41-212ENST00000511040 RABGEF1Q9UJ41 708 aa13.84□□□□□ -0.19
DDX41-212ENST00000511040 ASXL3Q9C0F0 2248 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 GLYATL1P3A0A0U1RQE8 302 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 FAM221BA6H8Z2 402 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 C2orf81A6NN90 581 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 KIF5CO60282 957 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 AP2A1O95782 977 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 CDK4P11802 303 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 ACP5P13686 325 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 RPL22P35268 128 aaKnown RBP13.83□□□□□ -0.2
DDX41-212ENST00000511040 ACTN2P35609 894 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 LMAN1P49257 510 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDX41-212ENST00000511040 SEPT6Q14141 434 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 PLA2G4EQ3MJ16 856 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 UNQ6494/PRO21346Q6UXR6 183 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 CHST15Q7LFX5 561 aaPredicted RBP13.83□□□□□ -0.2
DDX41-212ENST00000511040 GSTA5Q7RTV2 222 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 PHYKPLQ8IUZ5 450 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 Q8N9G6 341 aaPredicted RBP13.83□□□□□ -0.2
DDX41-212ENST00000511040 GPR156Q8NFN8 814 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 BRSK1Q8TDC3 778 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 COG1Q8WTW3 980 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 ZDHHC1Q8WTX9 485 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 PATE1Q8WXA2 126 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 NAT6Q93015 286 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 LRRC45Q96CN5 670 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 TMEM121BQ9BXQ6 578 aaPredicted RBP13.83□□□□□ -0.2
DDX41-212ENST00000511040 AP1M1Q9BXS5 423 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 TRIM39Q9HCM9 518 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 RAB6BQ9NRW1 208 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 VPS18Q9P253 973 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 FKBPLQ9UIM3 349 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 KCNK6Q9Y257 313 aa13.83□□□□□ -0.2
DDX41-212ENST00000511040 MYLKQ15746 1914 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 RP1P56715 2156 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 TRBV23OR9-2A0A075B6M9 112 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 CCDC78A2IDD5 438 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 E7EVH7 732 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 GAPDHSO14556 408 aaPredicted RBP13.82□□□□□ -0.2
DDX41-212ENST00000511040 PSMD3O43242 534 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 GRID2O43424 1007 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 NUAK1O60285 661 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 ECEL1O95672 775 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 CRTAMO95727 393 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 MT-CO3P00414 261 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 GP1BAP07359 652 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 ZNF140P52738 457 aaPredicted RBP13.82□□□□□ -0.2
DDX41-212ENST00000511040 POU6F1Q14863 301 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 C14orf28Q4W4Y0 310 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 ZDHHC20Q5W0Z9 365 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 PDPK2PQ6A1A2 396 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 DRICH1Q6PGQ1 229 aaPredicted RBP13.82□□□□□ -0.2
DDX41-212ENST00000511040 OGFOD3Q6PK18 319 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 OR52K1Q8NGK4 314 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 OR13C4Q8NGS5 318 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 PBKQ96KB5 322 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 FAM96AQ9H5X1 160 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 DRG1Q9Y295 367 aaKnown RBP13.82□□□□□ -0.2
DDX41-212ENST00000511040 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 RNF215Q9Y6U7 377 aa13.82□□□□□ -0.2
DDX41-212ENST00000511040 ARHGEF17Q96PE2 2063 aaPredicted RBP13.82□□□□□ -0.2
DDX41-212ENST00000511040 ZNF185O15231 689 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 LDB2O43679 373 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 SNX2O60749 519 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 PRAMEF1O95521 474 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 EML2O95834 649 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 FDFT1P37268 417 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 GRIA1P42261 906 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 TERF1P54274 439 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX41-212ENST00000511040 TRIP13Q15645 432 aaPredicted RBP13.81□□□□□ -0.2
DDX41-212ENST00000511040 PPP1R21Q6ZMI0 780 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 ZNF398Q8TD17 642 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 DNAJC1Q96KC8 554 aaKnown RBP13.81□□□□□ -0.2
DDX41-212ENST00000511040 VPS35Q96QK1 796 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 RMI1Q9H9A7 625 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 PAK5Q9P286 719 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
DDX41-212ENST00000511040 AKAP13Q12802 2813 aa13.81□□□□□ -0.2
DDX41-212ENST00000511040 TRABD2BA6NFA1 517 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 PPFIA2O75334 1257 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
DDX41-212ENST00000511040 SRP72O76094 671 aaKnown RBP13.8□□□□□ -0.2
DDX41-212ENST00000511040 CDK14O94921 469 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 RPLP0P05388 317 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms