RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MDM1Q8TC05 714 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 TMEM74Q96NL1 305 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 GFM1Q96RP9 751 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 FAM118BQ9BPY3 351 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 STN1Q9H668 368 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 LRRC40Q9H9A6 602 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 SMOXQ9NWM0 555 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 OAS3Q9Y6K5 1087 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 PLXNB3Q9ULL4 1909 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 GOLGA4Q13439 2230 aaKnown RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 GLYATL1P3A0A0U1RQE8 302 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 F5H423 210 aaPredicted RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 AURKAO14965 403 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 CHUKO15111 745 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 STX7O15400 261 aaKnown RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 GRID2O43424 1007 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 KCNJ13O60928 360 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 DXOO77932 396 aaKnown RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 AGTP01019 485 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 LPOP22079 712 aaPredicted RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 AK4P27144 223 aaPredicted RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 ACTN2P35609 894 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 LSSP48449 732 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 CLDN6P56747 220 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 FAM182AQ5T1J6 154 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 MARCH9Q86YJ5 346 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 ANP32BQ92688 251 aaKnown RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 GORASP1Q9BQQ3 440 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 LRRN3Q9H3W5 708 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 POLR1BQ9H9Y6 1135 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 IL26Q9NPH9 171 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 ATXN10Q9UBB4 475 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 PPP2R2CQ9Y2T4 447 aa19.67■□□□□ 0.74
SFXN1-209ENST00000508290 KMT2BQ9UMN6 2715 aaPredicted RBP19.67■□□□□ 0.74
SFXN1-209ENST00000508290 OR5K4A6NMS3 321 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 SRRM3A6NNA2 597 aaPredicted RBP19.66■□□□□ 0.74
SFXN1-209ENST00000508290 RHPN2P1A8MT19 583 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 D6RAR5 112 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 KMOO15229 486 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 LIASO43766 372 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 USP12O75317 370 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 ECEL1O95672 775 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 RPLP0P05388 317 aaKnown RBP19.66■□□□□ 0.74
SFXN1-209ENST00000508290 HADHAP40939 763 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 FASLGP48023 281 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 GTF2H3Q13889 308 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 LDLRAP1Q5SW96 308 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 CHST15Q7LFX5 561 aaPredicted RBP19.66■□□□□ 0.74
SFXN1-209ENST00000508290 SPRED1Q7Z699 444 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 LINC00523Q86TU6 105 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 LRRTM4Q86VH4 590 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 ARL14Q8N4G2 192 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 PTCD2Q8WV60 388 aaKnown RBP19.66■□□□□ 0.74
SFXN1-209ENST00000508290 TMEM159Q96B96 161 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 LIN37Q96GY3 246 aaPredicted RBP19.66■□□□□ 0.74
SFXN1-209ENST00000508290 TTC25Q96NG3 672 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 DPYSL5Q9BPU6 564 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 TBL1YQ9BQ87 522 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 TIMM29Q9BSF4 260 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 TMEM121Q9BTD3 319 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 STRADBQ9C0K7 418 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 OR2AG1Q9H205 316 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 PCDHGA8Q9Y5G5 932 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 RNF215Q9Y6U7 377 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 ASPMQ8IZT6 3477 aa19.66■□□□□ 0.74
SFXN1-209ENST00000508290 KIR2DS5A0A0G2JLQ3 304 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 A0A0G2JNG1 304 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 KLHL33A6NCF5 533 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 KIR2DS3K7RE56 304 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ZNF8P17098 575 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 VCLP18206 1134 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 CCKBRP32239 447 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 KIR2DS5Q14953 304 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 OASLQ15646 514 aaKnown RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ATP13A5Q4VNC0 1218 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 DRICH1Q6PGQ1 229 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ADGRG6Q86SQ4 1221 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 NAGSQ8N159 534 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 SH3KBP1Q96B97 665 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ZNF514Q96K75 400 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ZNF578Q96N58 590 aaPredicted RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 SYNDIG1Q9H7V2 258 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 BPIFA1Q9NP55 256 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 HOMER3Q9NSC5 361 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 RABGEF1Q9UJ41 708 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 R3HDM2Q9Y2K5 976 aaKnown RBP19.65■□□□□ 0.74
SFXN1-209ENST00000508290 PCDHB1Q9Y5F3 818 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ENTPD2Q9Y5L3 495 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 ST14Q9Y5Y6 855 aa19.65■□□□□ 0.74
SFXN1-209ENST00000508290 CCDC187A0A096LP49 1063 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 CDK14O94921 469 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 AP2A1O95782 977 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 ACP5P13686 325 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 ERVPABLB-1P60509 514 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 KCTD11Q693B1 232 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 C4orf22Q6V702 233 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 SFRP1Q8N474 314 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 DDHD1Q8NEL9 900 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 WDR36Q8NI36 951 aaKnown RBP19.64■□□□□ 0.73
SFXN1-209ENST00000508290 GDAP1Q8TB36 358 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms