RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PKP2Q99959 881 aa14.41□□□□□ -0.1
DDX41-208ENST00000507955 SMG9Q9H0W8 520 aaKnown RBP14.41□□□□□ -0.1
DDX41-208ENST00000507955 PRORSD1PA6NEY8 169 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 STX7O15400 261 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 AP1G1O43747 822 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 OGNP20774 298 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 SUOXP51687 545 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 CDKL1Q00532 357 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 LRP8Q14114 963 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 LYSMD3Q7Z3D4 306 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 CLYBLQ8N0X4 340 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 PDZD8Q8NEN9 1154 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 FUBP1Q96AE4 644 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 VPS51Q9UID3 782 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 BACE2Q9Y5Z0 518 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ANKRD33BA6NCL7 494 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 DENRO43583 198 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 BNIP3LO60238 219 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 FKTNO75072 461 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 TFAP2AP05549 437 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 HK3P52790 923 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 DIO3P55073 304 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 RHOAP61586 193 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 VPS26BQ4G0F5 336 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 AFTPHQ6ULP2 937 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 RETREG3Q86VR2 466 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 FBXO39Q8N4B4 442 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 METTL25Q8N6Q8 603 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 DIS3LQ8TF46 1054 aaKnown RBP14.4□□□□□ -0.1
DDX41-208ENST00000507955 NUDT8Q8WV74 236 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ATP6V1E2Q96A05 226 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ABCG8Q9H221 673 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 LHX3Q9UBR4 397 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ZNF225Q9UK10 706 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 CPQQ9Y646 472 aa14.4□□□□□ -0.1
DDX41-208ENST00000507955 ACOT8O14734 319 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 AZIN1O14977 448 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 TSPAN12O95859 305 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 SOD2P04179 222 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 HSPA1AP0DMV8 641 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 HSPA1BP0DMV9 641 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 SLC26A3P40879 764 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 CLCQ05315 142 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 LSAMPQ13449 338 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 SQLEQ14534 574 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 PLA2G4EQ3MJ16 856 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 SETD3Q86TU7 594 aaPredicted RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 CLDN19Q8N6F1 224 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 TUBGCP3Q96CW5 907 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 RPL10LQ96L21 214 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 MYRFLQ96LU7 910 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 BOCQ9BWV1 1114 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 TNKS2Q9H2K2 1166 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 AP4B1Q9Y6B7 739 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 PRSS51A0A1B0GVH4 220 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 NR5A2O00482 541 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 CXCL10P02778 98 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 SNRPB2P08579 225 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 CES1P23141 567 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 APLP1P51693 650 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 INHBCP55103 352 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 BTG3Q14201 252 aaPredicted RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 HERC3Q15034 1050 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 C6orf52Q5T4I8 152 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 KLHDC10Q6PID8 442 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 NCEH1Q6PIU2 408 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 PAF1Q8N7H5 531 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 PEX13Q92968 403 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 KIAA1191Q96A73 305 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 NMD3Q96D46 503 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 LINGO1Q96FE5 620 aa14.39□□□□□ -0.11
DDX41-208ENST00000507955 TFB2MQ9H5Q4 396 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 INTS10Q9NVR2 710 aaKnown RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 EVLQ9UI08 416 aaPredicted RBP14.39□□□□□ -0.11
DDX41-208ENST00000507955 MYOFQ9NZM1 2061 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 A0A1B0GTW7 788 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 MRASO14807 208 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 SLC22A2O15244 555 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 GREM1O60565 184 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 PKMP14618 531 aaKnown RBP14.38□□□□□ -0.11
DDX41-208ENST00000507955 ITGB8P26012 769 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 NFKB2Q00653 900 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 RAD51Q06609 339 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 CDH18Q13634 790 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 IKBKEQ14164 716 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
DDX41-208ENST00000507955 IL23RQ5VWK5 629 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 HS6ST3Q8IZP7 471 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 GALNT4Q8N4A0 578 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 TTC30BQ8N4P2 665 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 AFAP1L2Q8N4X5 818 aa14.38□□□□□ -0.11
DDX41-208ENST00000507955 CD200R1Q8TD46 325 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms