RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ILF3Q12906 894 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 RPA4Q13156 261 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 NAB1Q13506 487 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PDE1CQ14123 709 aaPredicted RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 FZD2Q14332 565 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 KIF19Q2TAC6 998 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 HLA-BQ31612 363 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 BCL7AQ4VC05 210 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CCDC38Q502W7 563 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 IZUMO3Q5VZ72 239 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 ASCL5Q7RTU5 278 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CCDC91Q7Z6B0 441 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CAND1Q86VP6 1230 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 HEATR4Q86WZ0 1026 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 KLHL7Q8IXQ5 586 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 RBM12BQ8IXT5 1001 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 IFT20Q8IY31 132 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 NXPE1Q8N323 547 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 MINDY1Q8N5J2 469 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SLC25A41Q8N5S1 370 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 GLIS1Q8NBF1 620 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 GPR26Q8NDV2 337 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 OR13H1Q8NG92 308 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 OR4K2Q8NGD2 314 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 OR4L1Q8NH43 312 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 FUBP1Q96AE4 644 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 GRAMD1AQ96CP6 724 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 EID2BQ96D98 161 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 TTC25Q96NG3 672 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 FAM167BQ9BTA0 163 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 EDEM2Q9BV94 578 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 RIOK2Q9BVS4 552 aaKnown RBP8.39□□□□□ -1.07
PDGFC-205ENST00000506880 GSDMCQ9BYG8 508 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 EPB41L1Q9H4G0 881 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SLC32A1Q9H598 525 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 GAREM1Q9H706 876 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 C10orf88Q9H8K7 445 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PCOLCE2Q9UKZ9 415 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PCDHB1Q9Y5F3 818 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 PCDHGA1Q9Y5H4 931 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 SPO11Q9Y5K1 396 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 MYLKQ15746 1914 aa8.39□□□□□ -1.07
PDGFC-205ENST00000506880 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 A0A1B0GVT2 93 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 CCDC189A1A4V9 331 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 RAD51BO15315 384 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 RAD51CO43502 376 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 PIAS2O75928 621 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 WNT1P04628 370 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 PCCBP05166 539 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 GP1BAP07359 652 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ZSCAN5DPP0CG00 497 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ETS1P14921 441 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ZNF7P17097 686 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 RPS3P23396 243 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ACRV1P26436 265 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 TNFRSF8P28908 595 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 POU6F1Q14863 301 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 LONRF1Q17RB8 773 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 TYSND1Q2T9J0 566 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 FASTKD1Q53R41 847 aaKnown RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 AGAP9Q5VTM2 703 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 STEAP4Q687X5 459 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 LRRC8EQ6NSJ5 796 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ZCCHC8Q6NZY4 707 aaKnown RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 B4GALNT4Q76KP1 1039 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ZNF534Q76KX8 674 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ARMCX6Q7L4S7 300 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 LRRTM4Q86VH4 590 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 GALNT13Q8IUC8 556 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 CNTN4Q8IWV2 1026 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 RBFAQ8N0V3 343 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SLC22A18ASQ8N1D0 253 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 OR13J1Q8NGT2 312 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 OR4C6Q8NH72 309 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SAP25Q8TEE9 199 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 NAT6Q93015 286 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ART4Q93070 314 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 STAMBPL1Q96FJ0 436 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 DCUN1D1Q96GG9 259 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SIGLEC10Q96LC7 697 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 PANX3Q96QZ0 392 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 COPS8Q99627 209 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 EBNA1BP2Q99848 306 aaKnown RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 DPYSL5Q9BPU6 564 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 CCM2Q9BSQ5 444 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ASB8Q9H765 288 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 UCK1Q9HA47 277 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 PPCSQ9HAB8 311 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 MBNL1Q9NR56 388 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms