RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 UCKL1Q9NWZ5 548 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 NLGN3Q9NZ94 848 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 IL17CQ9P0M4 197 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 NFKBIL1Q9UBC1 381 aaPredicted RBP7.22□□□□□ -1.25
GYPB-206ENST00000506516 KLF15Q9UIH9 416 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SPO11Q9Y5K1 396 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 SAR1BQ9Y6B6 198 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.22□□□□□ -1.256e-10■■■■■ 33.8
GYPB-206ENST00000506516 DGKBQ9Y6T7 804 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 PCDH15Q96QU1 1955 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 FAM186AA6NE01 2351 aa7.22□□□□□ -1.25
GYPB-206ENST00000506516 PLXNA2O75051 1894 aa7.21□□□□□ -1.25
GYPB-206ENST00000506516 SHROOM3Q8TF72 1996 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 PRSS38A1L453 326 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 CTAGE9A4FU28 777 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 LMO7DNF2Z398 122 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 AP3B1O00203 1094 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 INPP4BO15327 924 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 YY2O15391 372 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ST8SIA5O15466 376 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 FFAR2O15552 330 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 SIGLEC6O43699 453 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 USP12O75317 370 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 CEACAM5P06731 702 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 IVLP07476 585 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ZSCAN5DPP0CG00 497 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ETS1P14921 441 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 CKMT2P17540 419 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 GPC1P35052 558 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 RPL22P35268 128 aaKnown RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 SPAM1P38567 509 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 HADHAP40939 763 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 PAFAH1B1P43034 410 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 GNPDA1P46926 289 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 KCNJ1P48048 391 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 DAB2P98082 770 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ILKQ13418 452 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 C1orf61Q13536 156 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 SPARCL1Q14515 664 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 HENMT1Q5T8I9 393 aaKnown RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 ALS2CLQ60I27 953 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 KCTD11Q693B1 232 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 DENND5AQ6IQ26 1287 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ZCCHC8Q6NZY4 707 aaKnown RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 PPP1R21Q6ZMI0 780 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TAF8Q7Z7C8 310 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 KLHDC8BQ8IXV7 354 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 RBFAQ8N0V3 343 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TAB3Q8N5C8 712 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 PRELID2Q8N945 189 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 FAM181AQ8N9Y4 354 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 GPR26Q8NDV2 337 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 BAHD1Q8TBE0 780 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 GRK7Q8WTQ7 553 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 COX14Q96I36 57 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TTC25Q96NG3 672 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 WDR24Q96S15 920 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 AGAP2Q99490 1192 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 NAPGQ99747 312 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 C19orf43Q9BQ61 176 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 GORASP1Q9BQQ3 440 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 AP1M1Q9BXS5 423 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 FRMD8Q9BZ67 464 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 TCEAL2Q9H3H9 227 aaPredicted RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 RMI1Q9H9A7 625 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TRIM39Q9HCM9 518 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 MRPL40Q9NQ50 206 aaKnown RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 KCND1Q9NSA2 647 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TRNAU1APQ9NX07 287 aaKnown RBP7.21□□□□□ -1.26
GYPB-206ENST00000506516 RNF14Q9UBS8 474 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 ZNHIT2Q9UHR6 403 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 APPL1Q9UKG1 709 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 SUFUQ9UMX1 484 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 SLC17A4Q9Y2C5 497 aa7.21□□□□□ -1.26
GYPB-206ENST00000506516 TRPM6Q9BX84 2022 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 DCHS1Q96JQ0 3298 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GLYATL1P3A0A0U1RQE8 302 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 FADS2P1A8MWK0 482 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GPR89AB7ZAQ6 455 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 TRIM38O00635 465 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ZNF185O15231 689 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 VEGFDO43915 354 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 SUN1O94901 812 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 SOD1P00441 154 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 APRTP07741 180 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ADRB1P08588 477 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 FTH1P19P0C7X4 201 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GPR89BP0CG08 455 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 CKMT1AP12532 417 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 TPH1P17752 444 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 COILP38432 576 aaPredicted RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 POLD2P49005 469 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 FNTAP49354 379 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 RNF144AP50876 292 aaPredicted RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 BASP1P80723 227 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 SARNPP82979 210 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 E2F1Q01094 437 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 CDH17Q12864 832 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms