RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 AP1M1Q9BXS5 423 aa17.66■□□□□ 0.42
SMN1-204ENST00000506163 OR2AG1Q9H205 316 aa17.66■□□□□ 0.42
SMN1-204ENST00000506163 TAAR2Q9P1P5 351 aa17.66■□□□□ 0.42
SMN1-204ENST00000506163 PADI4Q9UM07 663 aa17.66■□□□□ 0.42
SMN1-204ENST00000506163 MSRB2Q9Y3D2 182 aa17.66■□□□□ 0.42
SMN1-204ENST00000506163 CCL22O00626 93 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 FANCGO15287 622 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 STX7O15400 261 aaKnown RBP17.65■□□□□ 0.42
SMN1-204ENST00000506163 NUAK1O60285 661 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 SPAM1P38567 509 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 ZNF140P52738 457 aaPredicted RBP17.65■□□□□ 0.42
SMN1-204ENST00000506163 XIAPP98170 497 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 PDPK2PQ6A1A2 396 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 SLC30A9Q6PML9 568 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 EFL1Q7Z2Z2 1120 aaKnown RBP17.65■□□□□ 0.42
SMN1-204ENST00000506163 OR52K1Q8NGK4 314 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 DTX3LQ8TDB6 740 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 MAIP1Q8WWC4 291 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 SCG3Q8WXD2 468 aaKnown RBP17.65■□□□□ 0.42
SMN1-204ENST00000506163 GATA6Q92908 595 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 CNTNAP3BQ96NU0 1288 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 CNTNAP3Q9BZ76 1288 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 TRIM39Q9HCM9 518 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 RAB6BQ9NRW1 208 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.65■□□□□ 0.428e-7■■□□□ 12.7
SMN1-204ENST00000506163 ZNHIT2Q9UHR6 403 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 SNX12Q9UMY4 172 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
SMN1-204ENST00000506163 ZFC3H1O60293 1989 aaKnown RBP17.65■□□□□ 0.42
SMN1-204ENST00000506163 GLYATL1P3A0A0U1RQE8 302 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 OPA1O60313 960 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 SUN1O94901 812 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 EML2O95834 649 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 FDFT1P37268 417 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 TMPRSS15P98073 1019 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 ILF3Q12906 894 aaKnown RBP eCLIP17.64■□□□□ 0.42
SMN1-204ENST00000506163 SEMA5AQ13591 1074 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 HES3Q5TGS1 186 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 C17orf82Q86X59 251 aaPredicted RBP17.64■□□□□ 0.42
SMN1-204ENST00000506163 GALNT13Q8IUC8 556 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 ZNF547Q8IVP9 402 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 CCDC89Q8N998 374 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 PATE1Q8WXA2 126 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 VPS35Q96QK1 796 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 GSDMCQ9BYG8 508 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 DPEP2Q9H4A9 486 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 PAK5Q9P286 719 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 SLC23A2Q9UGH3 650 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 FKBPLQ9UIM3 349 aa17.64■□□□□ 0.42
SMN1-204ENST00000506163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.42
SMN1-204ENST00000506163 C2orf81A6NN90 581 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 C1QTNF9BB2RNN3 333 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 B4DGG1 531 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 CHUKO15111 745 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 PSMD3O43242 534 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 GP1BAP07359 652 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 C1QTNF9P0C862 333 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 DUSP3P51452 185 aaPredicted RBP17.64■□□□□ 0.41
SMN1-204ENST00000506163 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 CAMK2BQ13554 666 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 PEX6Q13608 980 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 POU6F1Q14863 301 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 CERCAMQ5T4B2 595 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 CDCP2Q5VXM1 449 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 TMPRSS12Q86WS5 348 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 C17orf53Q8N3J3 647 aaPredicted RBP17.64■□□□□ 0.41
SMN1-204ENST00000506163 ACTRT1Q8TDG2 376 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 CCDC97Q96F63 343 aaPredicted RBP17.64■□□□□ 0.41
SMN1-204ENST00000506163 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.41
SMN1-204ENST00000506163 FEZ2Q9UHY8 353 aaPredicted RBP17.64■□□□□ 0.41
SMN1-204ENST00000506163 WDFY3Q8IZQ1 3526 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 COL27A1Q8IZC6 1860 aaPredicted RBP17.63■□□□□ 0.41
SMN1-204ENST00000506163 GRID2O43424 1007 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 PPFIA2O75334 1257 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 CDK4P11802 303 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 ACTR1BP42025 376 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 MAZP56270 477 aaKnown RBP17.63■□□□□ 0.41
SMN1-204ENST00000506163 ACTR1AP61163 376 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 GNG11P61952 73 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 E2F1Q01094 437 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 HLTFQ14527 1009 aaKnown RBP eCLIP17.63■□□□□ 0.41
SMN1-204ENST00000506163 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
SMN1-204ENST00000506163 CYP1B1Q16678 543 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 ZDHHC20Q5W0Z9 365 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 CHST15Q7LFX5 561 aaPredicted RBP17.63■□□□□ 0.41
SMN1-204ENST00000506163 NAGSQ8N159 534 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 ZNF398Q8TD17 642 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 NAT14Q8WUY8 206 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 GLMNQ92990 594 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 DNAJC1Q96KC8 554 aaKnown RBP17.63■□□□□ 0.41
SMN1-204ENST00000506163 RMI1Q9H9A7 625 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 KCNK6Q9Y257 313 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 NEU2Q9Y3R4 380 aa17.63■□□□□ 0.41
SMN1-204ENST00000506163 UNC13CQ8NB66 2214 aa17.62■□□□□ 0.41
SMN1-204ENST00000506163 IGF2RP11717 2491 aa17.62■□□□□ 0.41
SMN1-204ENST00000506163 MAP1BP46821 2468 aaKnown RBP17.62■□□□□ 0.41
SMN1-204ENST00000506163 ZNF106Q9H2Y7 1883 aaKnown RBP17.62■□□□□ 0.41
SMN1-204ENST00000506163 MROH6A6NGR9 719 aa17.62■□□□□ 0.41
SMN1-204ENST00000506163 ERI2A8K979 691 aaKnown RBP17.62■□□□□ 0.41
SMN1-204ENST00000506163 ECEL1O95672 775 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms