RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SPG21Q9NZD8 308 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 MYRFQ9Y2G1 1151 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 SOCS2O14508 198 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 AZIN1O14977 448 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 GOT2P00505 430 aaKnown RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 IGLV3-27P01718 113 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 CKMT2P17540 419 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 CAPN3P20807 821 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 ATP5C1P36542 298 aaKnown RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 GRIA3P42263 894 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 FOXA1P55317 472 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 IL10RBQ08334 325 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 SEMA3AQ14563 771 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 CYTH1Q15438 398 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 INTS11Q5TA45 600 aaKnown RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 SLC15A3Q8IY34 581 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 MFSD2AQ8NA29 543 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 FAM110BQ8TC76 370 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 OVCA2Q8WZ82 227 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 EZH1Q92800 747 aaPredicted RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 DNAJC1Q96KC8 554 aaKnown RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 YME1L1Q96TA2 773 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 TCF12Q99081 682 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 TFB2MQ9H5Q4 396 aaKnown RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 SDR39U1Q9NRG7 319 aaPredicted RBP16.85■□□□□ 0.29
LIN54-204ENST00000505397 DNMT3LQ9UJW3 386 aa16.85■□□□□ 0.29
LIN54-204ENST00000505397 PLOD2O00469 737 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 DLGAP1O14490 977 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 PIP5K1BO14986 540 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 CD3EAPO15446 510 aaKnown RBP16.84■□□□□ 0.29
LIN54-204ENST00000505397 SIX3O95343 332 aaPredicted RBP16.84■□□□□ 0.29
LIN54-204ENST00000505397 GLP2RO95838 553 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 ITGB8P26012 769 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 GRB7Q14451 532 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 VEPH1Q14D04 833 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 COQ5Q5HYK3 327 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 LCN8Q6JVE9 175 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 ZNF354CQ86Y25 554 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 HM13Q8TCT9 377 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 IGSF8Q969P0 613 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 CCT7Q99832 543 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 RC3H2Q9HBD1 1191 aaKnown RBP16.84■□□□□ 0.29
LIN54-204ENST00000505397 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 RIMKLBQ9ULI2 386 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 PTGDR2Q9Y5Y4 395 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 DRGXA6NNA5 263 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 H3BMM5 538 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 STAMBPO95630 424 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 KIF19Q2TAC6 998 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 SPATS1Q496A3 300 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 FBXL22Q6P050 247 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 MIER2Q8N344 545 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
LIN54-204ENST00000505397 FEM1CQ96JP0 617 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 TIMMDC1Q9NPL8 285 aa16.84■□□□□ 0.29
LIN54-204ENST00000505397 TRIM64CA6NLI5 447 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 UBXN8O00124 270 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 NR5A2O00482 541 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 HNRNPRO43390 633 aaKnown RBP16.83■□□□□ 0.29
LIN54-204ENST00000505397 ABLIM3O94929 683 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 SEC24AO95486 1093 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 EPOP01588 193 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 ACRP10323 421 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 MRPL19P49406 292 aaKnown RBP16.83■□□□□ 0.29
LIN54-204ENST00000505397 BNIP2Q12982 314 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 VPS26BQ4G0F5 336 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 GRIN3AQ8TCU5 1115 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 PPWD1Q96BP3 646 aaKnown RBP16.83■□□□□ 0.29
LIN54-204ENST00000505397 AGPAT4Q9NRZ5 378 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 CMTM6Q9NX76 183 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.83■□□□□ 0.296e-8■■■■□ 22.2
LIN54-204ENST00000505397 YIPF1Q9Y548 306 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 ARL5AQ9Y689 179 aa16.83■□□□□ 0.29
LIN54-204ENST00000505397 CCDC162PA2VCL2 907 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 LRRC14BA6NHZ5 514 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 PRRG1O14668 218 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 KIAA0355O15063 1070 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 GJB3O75712 270 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 RPP40O75818 363 aaKnown RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 SLC4A1P02730 911 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 HLA-DPA1P20036 260 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 OGNP20774 298 aaKnown RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 SERINC3Q13530 473 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 TYSND1Q2T9J0 566 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 MAP7D1Q3KQU3 841 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 MRNIPQ6NTE8 343 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 RAB44Q7Z6P3 723 aaPredicted RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 FIBCD1Q8N539 461 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 DRAXINQ8NBI3 349 aaPredicted RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 B4GALNT2Q8NHY0 566 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.83■□□□□ 0.28
LIN54-204ENST00000505397 RMND5BQ96G75 393 aaPredicted RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 AARSD1Q9BTE6 412 aaKnown RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 DDX18Q9NVP1 670 aaKnown RBP16.83■□□□□ 0.28
LIN54-204ENST00000505397 TRPM5Q9NZQ8 1165 aa16.83■□□□□ 0.28
LIN54-204ENST00000505397 GIMAP2Q9UG22 337 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms