RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 CDRT15Q96T59 188 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 C1QTNF3Q9BXJ4 246 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 MRPL1Q9BYD6 325 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 UTP6Q9NYH9 597 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 IKZF3Q9UKT9 509 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 INTS6Q9UL03 887 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 DHRS7Q9Y394 339 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 DNAJC15Q9Y5T4 150 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 C1orf232A0A0U1RR37 186 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 LRRC14BA6NHZ5 514 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 PSMD12O00232 456 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 CCL16O15467 120 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 ATP6V1C1P21283 382 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 SERPINA4P29622 427 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 HNF1BP35680 557 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 ERVFC1P60507 584 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 LCP2Q13094 533 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 CCNIQ14094 377 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 PPP1R3AQ16821 1122 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 GEN1Q17RS7 908 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 DGKKQ5KSL6 1271 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 BNC2Q6ZN30 1099 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 RTL10Q7L3V2 364 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 SNX20Q7Z614 316 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 GPSM1Q86YR5 675 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 LINGO1Q96FE5 620 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 TNKS2Q9H2K2 1166 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 NMRK1Q9NWW6 199 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 LZTS1Q9Y250 596 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 WASF2Q9Y6W5 498 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 KIAA1671Q9BY89 1806 aa15.31■□□□□ 0.04
SNCAIP-207ENST00000504884 NPEPPSL1A6NEC2 478 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 NRG2O14511 850 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 SORBS2O94875 1100 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 BAG2O95816 211 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 ACADSP16219 412 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CLCN7P51798 805 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 PTPN5P54829 565 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 PTK2BQ14289 1009 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 FASTKQ14296 549 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CDKN3Q16667 212 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 PITRM1Q5JRX3 1037 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 TCHHL1Q5QJ38 904 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 KANK2Q63ZY3 851 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CYHR1Q6ZMK1 362 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 SERPINA9Q86WD7 417 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CMTM8Q8IZV2 173 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CBARPQ8N350 705 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 MRPL43Q8N983 215 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 GRIN3AQ8TCU5 1115 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 SLC26A7Q8TE54 656 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CCDC124Q96CT7 223 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 NSUN5Q96P11 429 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 TUBGCP5Q96RT8 1024 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CLPBQ9H078 707 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 SMG9Q9H0W8 520 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 ASB8Q9H765 288 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 WDR41Q9HAD4 459 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 BCAP29Q9UHQ4 241 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 GBF1Q92538 1859 aa15.3■□□□□ 0.04
SNCAIP-207ENST00000504884 CAPN8A6NHC0 703 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 PPP6CO00743 305 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 GRM6O15303 877 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 MAP3K7O43318 606 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 SNX2O60749 519 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 CLDN7O95471 211 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 PRAMEF1O95521 474 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 MLYCDO95822 493 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 RPS17P08708 135 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 SRCP12931 536 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 ENO3P13929 434 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 PTPN2P17706 415 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 ITGALP20701 1170 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 GKP32189 559 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 ACADVLP49748 655 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 MYLK3Q32MK0 819 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 AGKQ53H12 422 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 PTRHD1Q6GMV3 140 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 FAM151BQ6UXP7 276 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 CPNE9Q8IYJ1 553 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 RBFAQ8N0V3 343 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 EFCAB3Q8N7B9 438 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 TWIST2Q8WVJ9 160 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 RPL10LQ96L21 214 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 C3orf30Q96M34 536 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 LYSMD1Q96S90 227 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 AKTIPQ9H8T0 292 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 SARS2Q9NP81 518 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 IL26Q9NPH9 171 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 HS3ST2Q9Y278 367 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 ATP6AP2A0A1C7CYW4 349 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 CFLARO15519 480 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 VPS4BO75351 444 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 ATP6AP2O75787 350 aa15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 SNRPB2P08579 225 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-207ENST00000504884 HLA-FP30511 346 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms