RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CERKLQ49MI3 558 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 IQCCQ4KMZ1 466 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 FBLN7Q53RD9 439 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 FAM91A1Q658Y4 838 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3GQ6DHY5 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TTC19Q6DKK2 380 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 VASNQ6EMK4 673 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3CQ6IPX1 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TMEM108Q6UXF1 575 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 FRMD5Q7Z6J6 570 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 CENPVQ7Z7K6 275 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3Q8IZP1 549 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 DSELQ8IZU8 1212 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 SIRT6Q8N6T7 355 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 PTGR2Q8N8N7 351 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 STEAP2Q8NFT2 490 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 SLC2A12Q8TD20 617 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 CELF1Q92879 486 aaKnown RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 HDAC11Q96DB2 347 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 MINDY3Q9H8M7 445 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 AKTIPQ9H8T0 292 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TREM1Q9NP99 234 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 ETNK2Q9NVF9 386 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 KLQ9UEF7 1012 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 PLCL2Q9UPR0 1127 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 ERVK-19Q9WJR5 959 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 LOC100506127A0A0U1RQW1 187 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MAGEB16A2A368 324 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 GAGE10A6NGK3 116 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 HS3ST1O14792 307 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CLPXO76031 633 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 ERLIN2O94905 339 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CH25HO95992 272 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 RPSAP08865 295 aaKnown RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 KCNA3P22001 575 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CALB2P22676 271 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MAGEA1P43355 309 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CDKN1BP46527 198 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MAP2K3P46734 347 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PNLIPRP2P54317 469 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 FOXL2P58012 376 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 GUCY1B3Q02153 619 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 HSPA14Q0VDF9 509 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 WDR43Q15061 677 aaKnown RBP eCLIP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 Q3ZCU0 254 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LIN9Q5TKA1 542 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LCN1P1Q5VSP4 162 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 DPY19L2P1Q6NXN4 242 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 TMEM81Q6P7N7 255 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CD300LDQ6UXZ3 194 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CCDC63Q8NA47 563 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LPGAT1Q92604 370 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MIB2Q96AX9 1013 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CFAP57Q96MR6 1250 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 GPR35Q9HC97 309 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MPP6Q9NZW5 540 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PLA2G4CQ9UP65 541 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 SALL3Q9BXA9 1300 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 AQP7P3A6NL99 342 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CASC3O15234 703 aaKnown RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 EXTL3O43909 919 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CFIP05156 583 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 INHBBP09529 407 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 CDK4P11802 303 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 SRCP12931 536 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 ARSAP15289 507 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PPP1R2P41236 205 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MMP13P45452 471 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 ECT2LQ008S8 904 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MC2RQ01718 297 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 NFATC3Q12968 1075 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 SCGB2A2Q13296 93 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 OLIG2Q13516 323 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 IL13RA2Q14627 380 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 AGBL2Q5U5Z8 902 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PPP1R2P3Q6NXS1 205 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 METAP1DQ6UB28 335 aaPredicted RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 ERO1BQ86YB8 467 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 AQP12AQ8IXF9 295 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 EFCAB13Q8IY85 973 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 SLC22A8Q8TCC7 542 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LINC01599Q8WXQ3 324 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PIBF1Q8WXW3 757 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LRR1Q96L50 414 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 MYRFLQ96LU7 910 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 ZNF583Q96ND8 569 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 PPP1R10Q96QC0 940 aaKnown RBP5.21□□□□□ -1.58
NIPBL-204ENST00000504430 LRRC40Q9H9A6 602 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 JKAMPQ9P055 326 aa5.21□□□□□ -1.58
NIPBL-204ENST00000504430 C2orf78A6NCI8 922 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 AHRRA9YTQ3 701 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CHADO15335 359 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 UBTFL6P0CB48 400 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ATP6V1C1P21283 382 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CHRNA4P43681 627 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RRADP55042 308 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CAP1Q01518 475 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms