RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 RNF224P0DH78 156 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 GJC1P36383 396 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 SLC1A1P43005 524 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 FASLGP48023 281 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 HCAR3P49019 387 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 PAPOLAP51003 745 aaKnown RBP15.68■□□□□ 0.1
DDR1-250ENST00000503628 ERV3-1Q14264 604 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 CNGA3Q16281 694 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 DOK6Q6PKX4 331 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 WDR74Q6RFH5 385 aaPredicted RBP15.68■□□□□ 0.1
DDR1-250ENST00000503628 RFX8Q6ZV50 586 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 GALNT11Q8NCW6 608 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 SLC37A2Q8TED4 501 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 NCSTNQ92542 709 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 RNF31Q96EP0 1072 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 CALR3Q96L12 384 aaKnown RBP15.68■□□□□ 0.1
DDR1-250ENST00000503628 SLC39A8Q9C0K1 460 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 GOLGA6AQ9NYA3 693 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 DONSONQ9NYP3 566 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 CWC15Q9P013 229 aaKnown RBP15.68■□□□□ 0.1
DDR1-250ENST00000503628 PCDHB3Q9Y5E6 796 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 ESPL1Q14674 2120 aa15.68■□□□□ 0.1
DDR1-250ENST00000503628 TNRC6AQ8NDV7 1962 aaKnown RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 A1L4Q6 167 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 TTLL8A6PVC2 850 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 H3BRJ5 948 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 POLR1CO15160 346 aaPredicted RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 DAPK3O43293 454 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 NRDCO43847 1150 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 SEMA7AO75326 666 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 ARL4AP40617 200 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 ETV3P41162 512 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 SCNN1BP51168 640 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 NDST2P52849 883 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 CCZ1BP86790 482 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 CCZ1P86791 482 aaPredicted RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDR1-250ENST00000503628 HSD11B1LQ7Z5J1 315 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 POLNQ7Z5Q5 900 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 CBARPQ8N350 705 aaPredicted RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 ESX1Q8N693 406 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 DTD2Q96FN9 168 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 SCARF2Q96GP6 870 aaPredicted RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 CINPQ9BW66 212 aaPredicted RBP15.67■□□□□ 0.1
DDR1-250ENST00000503628 PCDH18Q9HCL0 1135 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 KCTD5Q9NXV2 234 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 TLK1Q9UKI8 766 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 TMEM98Q9Y2Y6 226 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 ADGRG1Q9Y653 693 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 DUSP10Q9Y6W6 482 aa15.67■□□□□ 0.1
DDR1-250ENST00000503628 TTC24A2A3L6 582 aaPredicted RBP15.66■□□□□ 0.1
DDR1-250ENST00000503628 ARHGAP42A6NI28 874 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 SPOPO43791 374 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 HEXIM1O94992 359 aaKnown RBP15.66■□□□□ 0.1
DDR1-250ENST00000503628 MAP3K6O95382 1288 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 COMTP21964 271 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 DLSTP36957 453 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 ARSEP51690 589 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 CDH6P55285 790 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 KIF5AQ12840 1032 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 DPYSQ14117 519 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 KRT81Q14533 505 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 ATP13A4Q4VNC1 1196 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 RAET1GQ6H3X3 334 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 C11orf63Q6NUN7 778 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 Q6ZVL8 140 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 TMEM135Q86UB9 458 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 SFRP1Q8N474 314 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 FAM71BQ8TC56 605 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 CPT1CQ8TCG5 803 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 CSPG4P5Q96PW8 444 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 OR2M4Q96R27 311 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 RCOR3Q9P2K3 495 aaPredicted RBP15.66■□□□□ 0.1
DDR1-250ENST00000503628 KLHL3Q9UH77 587 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 POLHQ9Y253 713 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 ALG6Q9Y672 507 aa15.66■□□□□ 0.1
DDR1-250ENST00000503628 MED13Q9UHV7 2174 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 A0A0U1RQJ8 604 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 RFPL1O75677 317 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 EML2O95834 649 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 PDGFAP04085 211 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 ERCC2P18074 760 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 VIPR1P32241 457 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 NAP1L1P55209 391 aaKnown RBP15.65■□□□□ 0.1
DDR1-250ENST00000503628 MAP7Q14244 749 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 PDK2Q15119 407 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 PTPRRQ15256 657 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 PYCR3Q53H96 274 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.65■□□□□ 0.1
DDR1-250ENST00000503628 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 ZNF787Q6DD87 383 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 MARK2Q7KZI7 788 aaKnown RBP15.65■□□□□ 0.1
DDR1-250ENST00000503628 DAAM2Q86T65 1068 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 MAP7D3Q8IWC1 876 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 RHOT1Q8IXI2 618 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 KCTD6Q8NC69 237 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 PDLIM2Q96JY6 352 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 GOLPH3Q9H4A6 298 aa15.65■□□□□ 0.1
DDR1-250ENST00000503628 CROTQ9UKG9 612 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms