RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 CT47A1Q5JQC4 288 aaPredicted RBP12.87□□□□□ -0.35
TRIO-205ENST00000503399 PPP1R2P3Q6NXS1 205 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 C9orf72Q96LT7 481 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 POLR1EQ9GZS1 481 aaKnown RBP12.87□□□□□ -0.35
TRIO-205ENST00000503399 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRIO-205ENST00000503399 RCOR3Q9P2K3 495 aaPredicted RBP12.87□□□□□ -0.35
TRIO-205ENST00000503399 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 CHKBQ9Y259 395 aa12.87□□□□□ -0.35
TRIO-205ENST00000503399 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
TRIO-205ENST00000503399 A1L4Q6 167 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 A6NCN8 305 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 FZD6O60353 706 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 PDGFAP04085 211 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 CCNYL3P0C7X3 344 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 AMD1P17707 334 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 SERPINB6P35237 376 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 PMS2P54278 862 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 DSC2Q02487 901 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 DPYSL2Q16555 572 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 PLA2G4EQ3MJ16 856 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 CAPRIN2Q6IMN6 1127 aaKnown RBP12.86□□□□□ -0.35
TRIO-205ENST00000503399 POLNQ7Z5Q5 900 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 AVL9Q8NBF6 648 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 CPT1CQ8TCG5 803 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 KLC4Q9NSK0 619 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
TRIO-205ENST00000503399 TNRC6AQ8NDV7 1962 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 C1orf232A0A0U1RR37 186 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 OR5K4A6NMS3 321 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 FADS2P1A8MWK0 482 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 GRID2O43424 1007 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 CREG1O75629 220 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 UBXN7O94888 489 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 VIPP01282 170 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 ATP1A3P13637 1013 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 TCF4P15884 667 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 IL1R2P27930 398 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 CRTC3Q6UUV7 619 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 GALNT11Q8NCW6 608 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 SSC4DQ8WTU2 575 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 CT55Q8WUE5 264 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 PLEKHG4BQ96PX9 1271 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 ZNF768Q9H5H4 540 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 RMI1Q9H9A7 625 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 PKD2L2Q9NZM6 624 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 CNOT6Q9ULM6 557 aaKnown RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 RP1L1Q8IWN7 2480 aaPredicted RBP12.85□□□□□ -0.35
TRIO-205ENST00000503399 UNC79Q9P2D8 2635 aa12.85□□□□□ -0.35
TRIO-205ENST00000503399 PDZK1P1A8MUH7 402 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 KIF1CO43896 1103 aaKnown RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 NUAK1O60285 661 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 MTA2O94776 668 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 C9P02748 559 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 FTLP02792 175 aaPredicted RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 CA4P22748 312 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 PCK1P35558 622 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 KRT81Q14533 505 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 IL11RAQ14626 422 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 INSCQ1MX18 579 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 ZNF648Q5T619 568 aaPredicted RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 TMEM26Q6ZUK4 368 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 ERGIC2Q96RQ1 377 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 WDR24Q96S15 920 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 TRIM55Q9BYV6 548 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 OR2AG1Q9H205 316 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 CARD9Q9H257 536 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 FAM83DQ9H4H8 585 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 PCDH18Q9HCL0 1135 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 SCHIP1Q9P0W5 487 aaPredicted RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 ATXN10Q9UBB4 475 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
TRIO-205ENST00000503399 PADI1Q9ULC6 663 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 DNAJC16Q9Y2G8 782 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 SLC30A1Q9Y6M5 507 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
TRIO-205ENST00000503399 MFSD11O43934 449 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 SEMA7AO75326 666 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 SPAG6O75602 509 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 SLC4A1P02730 911 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 RNF224P0DH78 156 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 RARAP10276 462 aa12.83□□□□□ -0.36
TRIO-205ENST00000503399 ZNF8P17098 575 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms