RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 HINT3Q9NQE9 182 aaKnown RBP5.8□□□□□ -1.48
NIPBL-203ENST00000503274 CNGB3Q9NQW8 809 aa5.8□□□□□ -1.48
NIPBL-203ENST00000503274 AASSQ9UDR5 926 aa5.8□□□□□ -1.48
NIPBL-203ENST00000503274 SMG6Q86US8 1419 aaKnown RBP5.8□□□□□ -1.48
NIPBL-203ENST00000503274 RGPD5Q99666 1765 aa5.8□□□□□ -1.48
NIPBL-203ENST00000503274 ANKRD36BQ8N2N9 1353 aa5.8□□□□□ -1.48
NIPBL-203ENST00000503274 USP47Q96K76 1375 aa5.8□□□□□ -1.48
NIPBL-203ENST00000503274 MAP3K19Q56UN5 1328 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 EVPLQ92817 2033 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 SBF2Q86WG5 1849 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 CD163L1Q9NR16 1453 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 LRRC37A3O60309 1634 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 A0A1W2PRG0 241 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 SRRM3A6NNA2 597 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 PAGE4O60829 102 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 MAOAP21397 527 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 TNFAIP3P21580 790 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 BSGP35613 385 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 FRG1Q14331 258 aaKnown RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 CALCRLQ16602 461 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 EIF2S3LQ2VIR3 472 aaKnown RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 RHBDF2Q6PJF5 856 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 TMTC3Q6ZXV5 915 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 BHLHA9Q7RTU4 235 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 MAP7D2Q96T17 732 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 TMEM47Q9BQJ4 181 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 IFIH1Q9BYX4 1025 aaKnown RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 KCNN2Q9H2S1 579 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 SLCO5A1Q9H2Y9 848 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 SCPEP1Q9HB40 452 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 OLA1Q9NTK5 396 aaKnown RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 ORC3Q9UBD5 711 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 RGPD3A6NKT7 1758 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-203ENST00000503274 RGPD4Q7Z3J3 1758 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 PEAK1Q9H792 1746 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 RREB1Q92766 1687 aa5.79□□□□□ -1.48
NIPBL-203ENST00000503274 FAM237AA0A1B0GTK4 181 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 BTBD18B2RXH4 712 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 AKR1B15C9JRZ8 316 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 SOCS6O14544 535 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PLRG1O43660 514 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PPP1R3DO95685 299 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 KRT10P13645 584 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 DAOP14920 347 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PSMA4P25789 261 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 MAN1A1P33908 653 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 RPS3AP61247 264 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 SLC39A14Q15043 492 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 SF3B4Q15427 424 aaKnown RBP eCLIP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 KRT24Q2M2I5 525 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 KIF19Q2TAC6 998 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PAPPA-AS1Q5QFB9 102 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 NUP188Q5SRE5 1749 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 GGNBP1Q5YKI7 109 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 CAPRIN2Q6IMN6 1127 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 C16orf82Q7Z2V1 217 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 ARMC9Q7Z3E5 817 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 LMO3Q8TAP4 145 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 RND1Q92730 232 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 HDAC2Q92769 488 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 MMABQ96EY8 250 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PERPQ96FX8 193 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 CSF3RQ99062 836 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 SH3GL2Q99962 352 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 C1QTNF5Q9BXJ0 243 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PPP1R3EQ9H7J1 279 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 FBRSL1Q9HCM7 1045 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 SMC4Q9NTJ3 1288 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 DLGAP2Q9P1A6 1054 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 ABI3Q9P2A4 366 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 LIMA1Q9UHB6 759 aaKnown RBP5.78□□□□□ -1.48
NIPBL-203ENST00000503274 PCDHGB1Q9Y5G3 927 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 UTRNP46939 3433 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 USP54Q70EL1 1684 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 RTL1A6NKG5 1358 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 KIF24Q5T7B8 1368 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 LTN1O94822 1766 aa5.78□□□□□ -1.48
NIPBL-203ENST00000503274 WNK3Q9BYP7 1800 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 CCNDBP1O95273 360 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 FTCDO95954 541 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 SRCP12931 536 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 CD53P19397 219 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 CHMP24386 653 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 PBX3P40426 434 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 DLG1Q12959 904 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 RRS1Q15050 365 aaKnown RBP5.77□□□□□ -1.49
NIPBL-203ENST00000503274 OASLQ15646 514 aaKnown RBP5.77□□□□□ -1.49
NIPBL-203ENST00000503274 IZUMO4Q1ZYL8 232 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 ATP13A5Q4VNC0 1218 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 SETMARQ53H47 684 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-203ENST00000503274 PRSS57Q6UWY2 283 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 SLC36A4Q6YBV0 504 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
NIPBL-203ENST00000503274 MAATS1Q7Z4T9 603 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 FOXRED2Q8IWF2 684 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 TMEM116Q8NCL8 245 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 LILRB1Q8NHL6 650 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-203ENST00000503274 WFIKKN2Q8TEU8 576 aa5.77□□□□□ -1.49
NIPBL-203ENST00000503274 ADGRG7Q96K78 797 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms