RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 KATNA1O75449 491 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 RFPL1O75677 317 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 KIAA0754O94854 1291 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 PRLP01236 227 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 FTLP02792 175 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 SLC2A4P14672 509 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 TYRP1P17643 537 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 PCK1P35558 622 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 SEPHS1P49903 392 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 UBE2IP63279 158 aaKnown RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 HENMT1Q5T8I9 393 aaKnown RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 ZNF653Q96CK0 615 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 STAMBPL1Q96FJ0 436 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 ELMO2Q96JJ3 720 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 PLEKHG4BQ96PX9 1271 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 OR6C1Q96RD1 312 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 TDRD1Q9BXT4 1180 aaKnown RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 POLR1EQ9GZS1 481 aaKnown RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 SCHIP1Q9P0W5 487 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 PLEKHB1Q9UF11 243 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-212ENST00000498540 SLC30A1Q9Y6M5 507 aa14.52□□□□□ -0.09
TRAF4-212ENST00000498540 CDC14CA4D256 554 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 MFSD11O43934 449 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 DNAJB5O75953 348 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 NDUFA10O95299 355 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 RARAP10276 462 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 GNLYP22749 145 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 SERPINB6P35237 376 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 LEPRP48357 1165 aaKnown RBP14.51□□□□□ -0.09
TRAF4-212ENST00000498540 PMS2P54278 862 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 ALG1LQ6GMV1 187 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 CAPRIN2Q6IMN6 1127 aaKnown RBP14.51□□□□□ -0.09
TRAF4-212ENST00000498540 PHYKPLQ8IUZ5 450 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 LPCAT1Q8NF37 534 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 ANKRD20A12PQ8NF67 263 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 TGM7Q96PF1 710 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 OSGEPL1Q9H4B0 414 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 RMI1Q9H9A7 625 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 ARFGAP3Q9NP61 516 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 ATXN10Q9UBB4 475 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 MYO1AQ9UBC5 1043 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 TTLL3Q9Y4R7 772 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 ADGRG1Q9Y653 693 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 SCINQ9Y6U3 715 aa14.51□□□□□ -0.09
TRAF4-212ENST00000498540 C1orf232A0A0U1RR37 186 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 LRRC10BA6NIK2 292 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 LRRC53A6NM62 1247 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 OR5K4A6NMS3 321 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 GRID2O43424 1007 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 NUAK1O60285 661 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 UBXN7O94888 489 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 AGFG2O95081 481 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 ZNF8P17098 575 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-212ENST00000498540 SPINT3P49223 89 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 MMRN1Q13201 1228 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 BOLA3Q53S33 107 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 ZNF648Q5T619 568 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-212ENST00000498540 E4F1Q66K89 784 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-212ENST00000498540 TMEM26Q6ZUK4 368 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 ZNF571Q7Z3V5 609 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-212ENST00000498540 RASGRP3Q8IV61 690 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 AVL9Q8NBF6 648 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 ARRDC2Q8TBH0 407 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 LYSMD1Q96S90 227 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 TRIM55Q9BYV6 548 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 TWSG1Q9GZX9 223 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 CARD9Q9H257 536 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 HSD3B7Q9H2F3 369 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 ZNF768Q9H5H4 540 aaKnown RBP14.5□□□□□ -0.09
TRAF4-212ENST00000498540 HAUS4Q9H6D7 363 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 UCK1Q9HA47 277 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 KLC4Q9NSK0 619 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 LNPEPQ9UIQ6 1025 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 DNPEPQ9ULA0 475 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 SHANK1Q9Y566 2161 aa14.5□□□□□ -0.09
TRAF4-212ENST00000498540 RP1L1Q8IWN7 2480 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-212ENST00000498540 PIPSLA2A3N6 862 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 DDX3XO00571 662 aaKnown RBP eCLIP14.49□□□□□ -0.092e-23■■■■■ 60.9
TRAF4-212ENST00000498540 KIF1CO43896 1103 aaKnown RBP14.49□□□□□ -0.09
TRAF4-212ENST00000498540 VPS4BO75351 444 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 CREG1O75629 220 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 RASSF9O75901 435 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 RNF224P0DH78 156 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 GZMAP12544 262 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 GARSP41250 739 aaKnown RBP14.49□□□□□ -0.09
TRAF4-212ENST00000498540 MYL5Q02045 173 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 SLC25A11Q02978 314 aaKnown RBP14.49□□□□□ -0.09
TRAF4-212ENST00000498540 NIPAL4Q0D2K0 466 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 DNASE1L3Q13609 305 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 IL11RAQ14626 422 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 PLA2G4EQ3MJ16 856 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 CRTC3Q6UUV7 619 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 RAVER1Q8IY67 606 aaKnown RBP14.49□□□□□ -0.09
TRAF4-212ENST00000498540 AOPEPQ8N6M6 819 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 CT55Q8WUE5 264 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 MAML1Q92585 1016 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 RSC1A1Q92681 617 aa14.49□□□□□ -0.09
TRAF4-212ENST00000498540 OR2AG1Q9H205 316 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms