RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 APOBEC1P41238 236 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 GARSP41250 739 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 NLRP5P59047 1200 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 PCGF3Q3KNV8 242 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 CFAP58Q5T655 872 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 PMS2CLQ68D20 193 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 KIAA0930Q6ICG6 404 aaPredicted RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 HIST3H2AQ7L7L0 130 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 SZRD1Q7Z422 152 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 TSPAN33Q86UF1 283 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 SATL1Q86VE3 508 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 ODF3L1Q8IXM7 274 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 ADGRF2Q8IZF7 708 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 RNF113BQ8IZP6 322 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 TAGAPQ8N103 731 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 RBMXL3Q8N7X1 1067 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF441Q8N8Z8 693 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 OR1J2Q8NGS2 313 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 ABTB1Q969K4 478 aaPredicted RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 CALML4Q96GE6 196 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 RSRC1Q96IZ7 334 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 IL17FQ96PD4 163 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 CTAGE1Q96RT6 745 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 PCYT2Q99447 389 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
PTPRK-215ENST00000498284 SIL1Q9H173 461 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 MAGIXQ9H6Y5 334 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 UBTD1Q9HAC8 227 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 TMEM30AQ9NV96 361 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 MTMR10Q9NXD2 777 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 STK39Q9UEW8 545 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 FBXL2Q9UKC9 423 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 PADI1Q9ULC6 663 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 PADI3Q9ULW8 664 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 ARHGEF40Q8TER5 1519 aa4.35□□□□□ -1.71
PTPRK-215ENST00000498284 IGHV4OR15-8A0A075B7B6 117 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 EIF4E1BA6NMX2 242 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 OGG1O15527 345 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 KCNK5O95279 499 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 ICAM1P05362 532 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 RB1P06400 928 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 SNRNP70P08621 437 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 PORP16435 677 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 GABRB1P18505 474 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 ANXA7P20073 488 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 UGT1A1P22309 533 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 ACADLP28330 430 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 CAMPP49913 170 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 ZBTB17Q13105 803 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 IKQ13123 557 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 KCTD2Q14681 263 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 DUSP28Q4G0W2 176 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 C18orf63Q68DL7 685 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 PAPD4Q6PIY7 484 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 UNQ6126/PRO20091Q6UXV3 157 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 CFAP77Q6ZQR2 320 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 CLEC17AQ6ZS10 378 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 GPR180Q86V85 440 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 SFR1Q86XK3 245 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 C1orf87Q8N0U7 546 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 NME8Q8N427 588 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 ACVR1CQ8NER5 493 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 OR5R1Q8NH85 324 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 HM13Q8TCT9 377 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 SLC20A1Q8WUM9 679 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 NSUN4Q96CB9 384 aaKnown RBP4.34□□□□□ -1.71
PTPRK-215ENST00000498284 QRFPRQ96P65 431 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 PLK3Q9H4B4 646 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 EPB41L5Q9HCM4 733 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 OGFRQ9NZT2 677 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 FBXL17Q9UF56 701 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 PCDHGB4Q9UN71 923 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 KLHL20Q9Y2M5 609 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 TAF1P21675 1872 aa4.34□□□□□ -1.71
PTPRK-215ENST00000498284 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 PTPRCP08575 1304 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CGNL1Q0VF96 1302 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 A0A1B0GUV1 79 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 LILRA5A6NI73 299 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 ANKRD28O15084 1053 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 KCNN4O15554 427 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GPC4O75487 556 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GJB3O75712 270 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CAMTA2O94983 1202 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 STARD3NLO95772 234 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 SRPRAP08240 638 aaKnown RBP4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CSH1P0DML2 217 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CSH2P0DML3 217 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 ACTN1P12814 892 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GCH1P30793 250 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 HOXA13P31271 388 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-215ENST00000498284 PSMB10P40306 273 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CLDN20P56880 219 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 RELQ04864 619 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-215ENST00000498284 SREBF2Q12772 1141 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms