RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CYP1B1Q16678 543 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 PYCR3Q53H96 274 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 DOK6Q6PKX4 331 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 TAF8Q7Z7C8 310 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GALNT13Q8IUC8 556 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 ARL10Q8N8L6 244 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 OR6C4Q8NGE1 309 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GPBAR1Q8TDU6 330 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 NAT6Q93015 286 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GLYATL1Q969I3 302 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 OR2M4Q96R27 311 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 TMEM168Q9H0V1 697 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 ETNK1Q9HBU6 452 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 TRIM39Q9HCM9 518 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 BPIFA1Q9NP55 256 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 IL26Q9NPH9 171 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 EIF2B3Q9NR50 452 aaKnown RBP11.36□□□□□ -0.59
HLA-B-254ENST00000497377 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GPR34Q9UPC5 381 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 WASF3Q9UPY6 502 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 ARL5AQ9Y689 179 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GLYATL1P3A0A0U1RQE8 302 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 EME2A4GXA9 379 aaPredicted RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 FUCA1P04066 466 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 APRTP07741 180 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 CELA2BP08218 269 aaPredicted RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 RPL22P35268 128 aaKnown RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 ADCY8P40145 1251 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 POLD2P49005 469 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 CDK16Q00536 496 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 CDH17Q12864 832 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 DNAJC3Q13217 504 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 OLIG2Q13516 323 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 SPARCL1Q14515 664 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 LDLRAP1Q5SW96 308 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 KCTD16Q68DU8 428 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 TRIM74Q86UV6 250 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 TMPRSS12Q86WS5 348 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 SLC35F3Q8IY50 421 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 PNPLA1Q8N8W4 532 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 FAM46DQ8NEK8 389 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 COG1Q8WTW3 980 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 MAGOHBQ96A72 148 aaKnown RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 MS4A14Q96JA4 679 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 NAPGQ99747 312 aaPredicted RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 ZCCHC2Q9C0B9 1178 aaKnown RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 CAAP1Q9H8G2 361 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 TMEM98Q9Y2Y6 226 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 NEUROG3Q9Y4Z2 214 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 OAS3Q9Y6K5 1087 aaKnown RBP11.35□□□□□ -0.59
HLA-B-254ENST00000497377 BPTFQ12830 3046 aa11.35□□□□□ -0.59
HLA-B-254ENST00000497377 ARHGEF17Q96PE2 2063 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ZFC3H1O60293 1989 aaKnown RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 PTPRBP23467 1997 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 LY6G6EA0A0G2JKS1 128 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 CTAGE9A4FU28 777 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 FAM221BA6H8Z2 402 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 LDB2O43679 373 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 HYAL3O43820 417 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 NUAK1O60285 661 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 DNAJC6O75061 913 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 S1PR4O95977 384 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ETS1P14921 441 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 KCNJ1P48048 391 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 FNTAP49354 379 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ZNF140P52738 457 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 SMAD1Q15797 465 aaKnown RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 CHRNA6Q15825 494 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ATP13A5Q4VNC0 1218 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 OGFOD3Q6PK18 319 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 FAM151BQ6UXP7 276 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 TMPRSS7Q7RTY8 843 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 CACTIN-AS1Q8N1I8 211 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 CHCHD4Q8N4Q1 142 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 DNAAF3Q8N9W5 541 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 OR4K2Q8NGD2 314 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 WDR48Q8TAF3 677 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 GRK7Q8WTQ7 553 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 STYXQ8WUJ0 223 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 ZNHIT2Q9UHR6 403 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 PADI4Q9UM07 663 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 GPSM3Q9Y4H4 160 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-B-254ENST00000497377 U3KQA8 63 aa11.34□□□□□ -0.59
HLA-B-254ENST00000497377 H7C0S8 307 aa11.33□□□□□ -0.6
HLA-B-254ENST00000497377 GAPDHSO14556 408 aaPredicted RBP11.33□□□□□ -0.6
HLA-B-254ENST00000497377 CHUKO15111 745 aa11.33□□□□□ -0.6
HLA-B-254ENST00000497377 KMOO15229 486 aa11.33□□□□□ -0.6
HLA-B-254ENST00000497377 GRID2O43424 1007 aa11.33□□□□□ -0.6
HLA-B-254ENST00000497377 BUD23O43709 281 aaKnown RBP11.33□□□□□ -0.6
HLA-B-254ENST00000497377 PHF2O75151 1096 aa11.33□□□□□ -0.6
HLA-B-254ENST00000497377 SRP72O76094 671 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms