RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ARSDP51689 593 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 NFATC2Q13469 925 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 KDELC2Q7Z4H8 507 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 SLC9B2Q86UD5 537 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 NT5DC3Q86UY8 548 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 FAM129CQ86XR2 697 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 RHOT2Q8IXI1 618 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 PMEPA1Q969W9 287 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 CCDC42Q96M95 316 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 AGAP3Q96P47 875 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 HERPUD2Q9BSE4 406 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 DDA1Q9BW61 102 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 SPATA16Q9BXB7 569 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 CEP41Q9BYV8 373 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 ASPSCR1Q9BZE9 553 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 OCIAD1Q9NX40 245 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 PDP2Q9P2J9 529 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 B3GALT1Q9Y5Z6 326 aa16.97■□□□□ 0.31
SMC4-226ENST00000497311 OR5K4A6NMS3 321 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 SNX2O60749 519 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 F3P13726 295 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 WT1P19544 449 aaPredicted RBP16.96■□□□□ 0.31
SMC4-226ENST00000497311 RAB15P59190 212 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 ZNF569Q5MCW4 686 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 SNAP47Q5SQN1 464 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 DCAF12Q5T6F0 453 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 LRRC38Q5VT99 294 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 WDR74Q6RFH5 385 aaPredicted RBP16.96■□□□□ 0.31
SMC4-226ENST00000497311 NPNTQ6UXI9 565 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 RFX6Q8HWS3 928 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 PHYKPLQ8IUZ5 450 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 IL22RA1Q8N6P7 574 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 NCSTNQ92542 709 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 NKD1Q969G9 470 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 EID2BQ96D98 161 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 IMP4Q96G21 291 aaKnown RBP16.96■□□□□ 0.31
SMC4-226ENST00000497311 TRIB3Q96RU7 358 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 CHP1Q99653 195 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 ZSCAN5AQ9BUG6 496 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.96■□□□□ 0.31
SMC4-226ENST00000497311 BRD8Q9H0E9 1235 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 SLC25A51Q9H1U9 297 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 MAGEE1Q9HCI5 957 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 RAD18Q9NS91 495 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 ABHD10Q9NUJ1 306 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 ATXN10Q9UBB4 475 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
SMC4-226ENST00000497311 KIR2DS5A0A0G2JLQ3 304 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 A0A0G2JNG1 304 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 A6NCN8 305 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 A8MU76 341 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 KIR2DS3K7RE56 304 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 MTA2O94776 668 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 SLC25A14O95258 325 aaPredicted RBP16.95■□□□□ 0.3
SMC4-226ENST00000497311 KRT1P04264 644 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 PIRTP0C851 137 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 ZNF8P17098 575 aaPredicted RBP16.95■□□□□ 0.3
SMC4-226ENST00000497311 UGT1A3P35503 534 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 EPHA4P54764 986 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 CYP4F2P78329 520 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 CDK18Q07002 472 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 NFATC3Q12968 1075 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 KIR2DS5Q14953 304 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 PCSK7Q16549 785 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 FAM182AQ5T1J6 154 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 TMC3Q7Z5M5 1100 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 AVL9Q8NBF6 648 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 GPR26Q8NDV2 337 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 RNF25Q96BH1 459 aaPredicted RBP16.95■□□□□ 0.3
SMC4-226ENST00000497311 OLFM3Q96PB7 478 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 GPR63Q9BZJ6 419 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 OR2AG1Q9H205 316 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
SMC4-226ENST00000497311 TRIM39Q9HCM9 518 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 SPTLC3Q9NUV7 552 aa16.95■□□□□ 0.3
SMC4-226ENST00000497311 DDX56Q9NY93 547 aaKnown RBP16.95■□□□□ 0.3
SMC4-226ENST00000497311 GPR89AB7ZAQ6 455 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 SLC28A2O43868 658 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 SLC4A1P02730 911 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 GPR89BP0CG08 455 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 SFTPCP11686 197 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 TNNT1P13805 278 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 SLC1A1P43005 524 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 CLCNKAP51800 687 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 DCDC1P59894 354 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 DYNLT1P63172 113 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 SLC14A2Q15849 920 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 TBR1Q16650 682 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 TEX44Q53QW1 395 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 ZNF648Q5T619 568 aaPredicted RBP16.94■□□□□ 0.3
SMC4-226ENST00000497311 ANKS6Q68DC2 871 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 PDPK2PQ6A1A2 396 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 CCDC70Q6NSX1 233 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 ARHGAP22Q7Z5H3 698 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 RHOT1Q8IXI2 618 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 CACNA2D3Q8IZS8 1091 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms