RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LINC00482Q8N8I6 264 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 OR52M1Q8NGK5 317 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC2A14Q8TDB8 520 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 DTD1Q8TEA8 209 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PYROXD1Q8WU10 500 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ASB15Q8WXK1 588 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 LRTOMTQ8WZ04 291 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ARHGEF26Q96DR7 871 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SIPA1Q96FS4 1042 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 QRFPRQ96P65 431 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 THUMPD3Q9BV44 507 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 APOL6Q9BWW8 343 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 HOXD1Q9GZZ0 328 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CLPBQ9H078 707 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 KLC2Q9H0B6 622 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 IKZF4Q9H2S9 585 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RIMS4Q9H426 269 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 C17orf75Q9HAS0 396 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CMTM6Q9NX76 183 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGA11Q9UKX5 1188 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CLCA2Q9UQC9 943 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 EIF3LQ9Y262 564 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ABCA10Q8WWZ4 1543 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RAPGEF6Q8TEU7 1601 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CHD1O14646 1710 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RFX7Q2KHR2 1363 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CDHR2Q9BYE9 1310 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 hCG_1809904A0A1W2PP81 198 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A1W2PPE2 198 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A1W2PR64 198 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 IQCF5A8MTL0 148 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 A8MV72 311 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 hCG_2039718K7EN88 272 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 K7ESF4 209 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DNALI1O14645 258 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TOR1AO14656 332 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DENRO43583 198 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TBC1D4O60343 1298 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 EXOC3O60645 756 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ATG13O75143 517 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TUSC2O75896 110 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CCNKO75909 580 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 UBXN7O94888 489 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 APOL3O95236 402 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SPDEFO95238 335 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 POMCP01189 267 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CYC1P08574 325 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GNAO1P09471 354 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ARP10275 920 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 RALBP11234 206 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP2A2P16615 1042 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FAHP16930 419 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 RGS2P41220 211 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEA1P43355 309 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HCAR3P49019 387 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ANXA11P50995 505 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 METAP1P53582 386 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 BCAR1P56945 870 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KRTAP10-2P60368 255 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF33AQ06730 810 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP24A1Q07973 514 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SNTA1Q13424 505 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FLOT2Q14254 428 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 RPS6KA2Q15349 733 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FBLN7Q53RD9 439 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 YIF1BQ5BJH7 314 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PITRM1Q5JRX3 1037 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TEX30Q5JUR7 227 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF772Q68DY9 489 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 VASNQ6EMK4 673 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLFN12LQ6IEE8 588 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NFRKBQ6P4R8 1299 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF530Q6P9A1 599 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KLHL35Q6PF15 583 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SUSD1Q6UWL2 747 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF813Q6ZN06 617 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ARMCX2Q7L311 632 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MOGAT3Q86VF5 341 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR65Q8IYL9 337 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ALLCQ8N6M5 410 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KBTBD3Q8NAB2 608 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TXNDC5Q8NBS9 432 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SETD9Q8NE22 299 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 OR7D4Q8NG98 312 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 OR8J2Q8NGG1 315 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CREB3L4Q8TEY5 395 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC20A1Q8WUM9 679 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 LIPHQ8WWY8 451 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PIGKQ92643 395 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GTF3AQ92664 365 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NSUN4Q96CB9 384 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MASTLQ96GX5 879 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PIWIL1Q96J94 861 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ELMO2Q96JJ3 720 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF558Q96NG5 402 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 LRRC37BQ96QE4 947 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DPYSL5Q9BPU6 564 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZFYVE21Q9BQ24 234 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC25A23Q9BV35 468 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 AMNQ9BXJ7 453 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms