RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 RPL26L1Q9UNX3 145 aaKnown RBP17.35■□□□□ 0.37
TMEM53-209ENST00000495630 POLHQ9Y253 713 aa17.35■□□□□ 0.37
TMEM53-209ENST00000495630 CHKBQ9Y259 395 aa17.35■□□□□ 0.37
TMEM53-209ENST00000495630 MN1Q10571 1320 aaPredicted RBP17.35■□□□□ 0.37
TMEM53-209ENST00000495630 K7EM74 188 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 GRID2O43424 1007 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 NUAK1O60285 661 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 MYBL1P10243 752 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 ZNF28P17035 718 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 CA4P22748 312 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 SPINT3P49223 89 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 MLLT10P55197 1068 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 UBE2IP63279 158 aaKnown RBP17.34■□□□□ 0.37
TMEM53-209ENST00000495630 MYL5Q02045 173 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 IHHQ14623 411 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
TMEM53-209ENST00000495630 PHYKPLQ8IUZ5 450 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 TRIM11Q96F44 468 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 PLEKHG4BQ96PX9 1271 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 TEX15Q9BXT5 2789 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 HAUS4Q9H6D7 363 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 PCDH18Q9HCL0 1135 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 HAUS2Q9NVX0 235 aa17.34■□□□□ 0.37
TMEM53-209ENST00000495630 KRT7P08729 469 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 CCNYL3P0C7X3 344 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 NR1D1P20393 614 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 PIGHQ14442 188 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-209ENST00000495630 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF571Q7Z3V5 609 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-209ENST00000495630 GALNT6Q8NCL4 622 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 CCHCR1Q8TD31 782 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 MAML1Q92585 1016 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 FATE1Q969F0 183 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF653Q96CK0 615 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
TMEM53-209ENST00000495630 ANO10Q9NW15 660 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 RCOR3Q9P2K3 495 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-209ENST00000495630 MYO1AQ9UBC5 1043 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 TLK1Q9UKI8 766 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 PADI1Q9ULC6 663 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 PCDHGA6Q9Y5G7 932 aa17.33■□□□□ 0.36
TMEM53-209ENST00000495630 NOTCH2Q04721 2471 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 USP9XQ93008 2570 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 GOLGA6L3A6NEY3 463 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 FADS2P1A8MWK0 482 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■□□ 18.6
TMEM53-209ENST00000495630 MATN3O15232 486 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 VPS4BO75351 444 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 KATNA1O75449 491 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 CREG1O75629 220 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 RFPL1O75677 317 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 UBXN7O94888 489 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 NDUFA10O95299 355 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 FURINP09958 794 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 TCF4P15884 667 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 AMD1P17707 334 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 IL4RP24394 825 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 GARSP41250 739 aaKnown RBP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF165P49910 485 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 DSC2Q02487 901 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ASIC2Q16515 512 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ANKRD20A8PQ5CZ79 823 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 CCDC122Q5T0U0 273 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 RASGRP3Q8IV61 690 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 APLFQ8IW19 511 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ARRDC2Q8TBH0 407 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 STAMBPL1Q96FJ0 436 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 OR6C1Q96RD1 312 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ISCUQ9H1K1 167 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF768Q9H5H4 540 aaKnown RBP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 PCDH9Q9HC56 1237 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 TRIM39Q9HCM9 518 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 RBM22Q9NW64 420 aaKnown RBP eCLIP17.32■□□□□ 0.36
TMEM53-209ENST00000495630 PKD2L2Q9NZM6 624 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 OGFRQ9NZT2 677 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 ATXN10Q9UBB4 475 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 VPS4AQ9UN37 437 aa17.32■□□□□ 0.36
TMEM53-209ENST00000495630 C1orf232A0A0U1RR37 186 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 PIPSLA2A3N6 862 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 LRRC53A6NM62 1247 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 GPR89AB7ZAQ6 455 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 KIAA0754O94854 1291 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 VIPP01282 170 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 MT-ND3P03897 115 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 GPR89BP0CG08 455 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 FGF5P12034 268 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 ZNF8P17098 575 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-209ENST00000495630 TYRP1P17643 537 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 CCNCP24863 283 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 SLC19A1P41440 591 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 PRKCIP41743 596 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 PMS2P54278 862 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 GFERP55789 205 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 GALNT2Q10471 571 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
TMEM53-209ENST00000495630 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms