RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 MC4RP32245 332 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 HADHAP40939 763 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 NPY2RP49146 381 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 BLKP51451 505 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 DHX34Q14147 1143 aaKnown RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 DEFB133Q30KQ1 61 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 PCID2Q5JVF3 399 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 TSTD2Q5T7W7 516 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 IZUMO3Q5VZ72 239 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 SYDE1Q6ZW31 735 aaPredicted RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 ZNF572Q7Z3I7 529 aaPredicted RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 ADGRG6Q86SQ4 1221 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 PHYKPLQ8IUZ5 450 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 PPIL6Q8IXY8 311 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 MPP5Q8N3R9 675 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 PPHLN1Q8NEY8 458 aaKnown RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 DTX3LQ8TDB6 740 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 CDKN2AIPNLQ96HQ2 116 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 TBATAQ96M53 351 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 VPS35Q96QK1 796 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 BFARQ9NZS9 450 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 APPL1Q9UKG1 709 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 GPSM3Q9Y4H4 160 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 RAD51CO43502 376 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 DNAJC6O75061 913 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 IVLP07476 585 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 ZNF8P17098 575 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-212ENST00000495497 CDKN1CP49918 316 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-212ENST00000495497 SARNPP82979 210 aaKnown RBP19.24■□□□□ 0.67
HDAC4-212ENST00000495497 ITGA9Q13797 1035 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 PUM1Q14671 1186 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC4-212ENST00000495497 SKIDA1Q1XH10 827 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 CES3Q6UWW8 571 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 MCUQ8NE86 351 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 OR13J1Q8NGT2 312 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 NAT14Q8WUY8 206 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 SCARF2Q96GP6 870 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-212ENST00000495497 SERPINB12Q96P63 405 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 SLC32A1Q9H598 525 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 TRIM39Q9HCM9 518 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 ZNHIT2Q9UHR6 403 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 ST14Q9Y5Y6 855 aa19.24■□□□□ 0.67
HDAC4-212ENST00000495497 CEP250Q9BV73 2442 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 YY2O15391 372 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 SIGLEC6O43699 453 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 KCNK5O95279 499 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 MYF5P13349 255 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CSRP1P21291 193 aaKnown RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 NOVA1P51513 510 aaKnown RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CKAP4Q07065 602 aaKnown RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 NFATC2Q13469 925 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 WHAMMP3Q1A5X7 153 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 PYCR3Q53H96 274 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 ZRANB3Q5FWF4 1079 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 GPRC6AQ5T6X5 926 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 FSTL5Q8N475 847 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 PNPLA1Q8N8W4 532 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 KIF18AQ8NI77 898 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 BAHD1Q8TBE0 780 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CCDC97Q96F63 343 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-212ENST00000495497 IL22Q9GZX6 179 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 VPS18Q9P253 973 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CRLS1Q9UJA2 301 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 SNX24Q9Y343 169 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 MRFAP1Q9Y605 127 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CSNK1G3Q9Y6M4 447 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 SLC30A1Q9Y6M5 507 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 CABIN1Q9Y6J0 2220 aa19.23■□□□□ 0.67
HDAC4-212ENST00000495497 TDRD6O60522 2096 aaKnown RBP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 SPAARA0A1B0GVQ0 90 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 CCDC162PA2VCL2 907 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 NEMP2A6NFY4 417 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 EFCAB8A8MWE9 144 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 H7C0S8 307 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 AP3B1O00203 1094 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 NUAK1O60285 661 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 PSMA3P25788 255 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 AK4P27144 223 aaPredicted RBP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 NMBRP28336 390 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 CTBSQ01459 385 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 TMEM115Q12893 351 aaPredicted RBP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 ELOCQ15369 112 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 INAVAQ3KP66 663 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 PSAPL1Q6NUJ1 521 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 SNX20Q7Z614 316 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 TAF8Q7Z7C8 310 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 NRROSQ86YC3 692 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 GALNT13Q8IUC8 556 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 AGGF1Q8N302 714 aaeCLIP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 OR4C6Q8NH72 309 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 HDAC10Q969S8 669 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 CNDP2Q96KP4 475 aaKnown RBP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 OR2M4Q96R27 311 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 C19orf43Q9BQ61 176 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 TRIM56Q9BRZ2 755 aaKnown RBP19.22■□□□□ 0.67
HDAC4-212ENST00000495497 NLGN3Q9NZ94 848 aa19.22■□□□□ 0.67
HDAC4-212ENST00000495497 LRP4O75096 1905 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 LMO7DNF2Z398 122 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 GRID2O43424 1007 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 BANF1O75531 89 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms