RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 GABREP78334 506 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
CTNS-207ENST00000495445 SQSTM1Q13501 440 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 ITPRIPL1Q6GPH6 555 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 ADGRG6Q86SQ4 1221 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 CDKL3Q8IVW4 592 aaPredicted RBP17.11■□□□□ 0.33
CTNS-207ENST00000495445 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
CTNS-207ENST00000495445 PATE1Q8WXA2 126 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 GLYATL1Q969I3 302 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 LIN37Q96GY3 246 aaPredicted RBP17.11■□□□□ 0.33
CTNS-207ENST00000495445 VPS35Q96QK1 796 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 FAM118BQ9BPY3 351 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 HACD3Q9P035 362 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 SATB2Q9UPW6 733 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 PRKAB1Q9Y478 270 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
CTNS-207ENST00000495445 C5orf60A6NFR6 353 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 TMX2-CTNND1H3BSU7 103 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 PPM1DO15297 605 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 KCNN4O15554 427 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 GRID2O43424 1007 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 ANXA9O76027 345 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 SLC25A14O95258 325 aaPredicted RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 AGTP01019 485 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 ZNF8P17098 575 aaPredicted RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 CCKBRP32239 447 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 GEMP55040 296 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 KIF26BQ2KJY2 2108 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 DARS2Q6PI48 645 aaKnown RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 TMPRSS9Q7Z410 1059 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 B3GNT8Q7Z7M8 397 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 TTC13Q8NBP0 860 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 IPMKQ8NFU5 416 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 WDR36Q8NI36 951 aaKnown RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 FERMT1Q9BQL6 677 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 BPIFA1Q9NP55 256 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 IL26Q9NPH9 171 aa17.1■□□□□ 0.33
CTNS-207ENST00000495445 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTNS-207ENST00000495445 AAR2Q9Y312 384 aaKnown RBP17.1■□□□□ 0.33
CTNS-207ENST00000495445 ZFC3H1O60293 1989 aaKnown RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 CCDC187A0A096LP49 1063 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 A6NCN8 305 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 F5H423 210 aaPredicted RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 ARHGAP6O43182 974 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 EML2O95834 649 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 FASLGP48023 281 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 CLPPQ16740 277 aaPredicted RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 ATP13A5Q4VNC0 1218 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 ZNF648Q5T619 568 aaPredicted RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 C19orf48Q6RUI8 117 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 CHST15Q7LFX5 561 aaPredicted RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 SFRP1Q8N474 314 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
CTNS-207ENST00000495445 SPATA13Q96N96 652 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 TSGA10Q9BZW7 698 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 OR2AG1Q9H205 316 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 ARNT2Q9HBZ2 717 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
CTNS-207ENST00000495445 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 PMS2P1A4D2B8 440 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 RHPN2P1A8MT19 583 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 CDRT15L2A8MXV6 281 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 GAPDHSO14556 408 aaPredicted RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 VEGFDO43915 354 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 PPFIA2O75334 1257 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 PSMB4P28070 264 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 CD1CP29017 333 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 INHBCP55103 352 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 OR1D5P58170 312 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 KHDC1Q4VXA5 237 aaKnown RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 DENND5AQ6IQ26 1287 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 CCDC110Q8TBZ0 833 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 TMEM74Q96NL1 305 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 TBC1D29Q9UFV1 150 aa17.08■□□□□ 0.32
CTNS-207ENST00000495445 ATXN7L1Q9ULK2 861 aaPredicted RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 R3HDM2Q9Y2K5 976 aaKnown RBP17.08■□□□□ 0.32
CTNS-207ENST00000495445 ZFYVE26Q68DK2 2539 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 GOLGA6L9A6NEM1 432 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 KRT86O43790 486 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 ITPKBP27987 946 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 TNNT3P45378 269 aaPredicted RBP17.07■□□□□ 0.32
CTNS-207ENST00000495445 EIF3IQ13347 325 aaKnown RBP17.07■□□□□ 0.32
CTNS-207ENST00000495445 OLIG2Q13516 323 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 COL28A1Q2UY09 1125 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 C3orf38Q5JPI3 329 aa17.07■□□□□ 0.32
CTNS-207ENST00000495445 KCTD11Q693B1 232 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms