RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ITGA9Q13797 1035 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 MEI1Q5TIA1 1274 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 RANBP10Q6VN20 620 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 ARL14Q8N4G2 192 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 TTC30BQ8N4P2 665 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 BRSK1Q8TDC3 778 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
HDAC4-211ENST00000494800 TBL1YQ9BQ87 522 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 STRADBQ9C0K7 418 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 POLR1BQ9H9Y6 1135 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 IL17CQ9P0M4 197 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 ATXN10Q9UBB4 475 aa17.46■□□□□ 0.39
HDAC4-211ENST00000494800 GLYATL1P3A0A0U1RQE8 302 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 D6RAR5 112 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 PSMD3O43242 534 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 ACP5P13686 325 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 LPOP22079 712 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 STIP1P31948 543 aaKnown RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 GPR3P46089 330 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 LSSP48449 732 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 MAZP56270 477 aaKnown RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 GABREP78334 506 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 CCZ1BP86790 482 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 CCZ1P86791 482 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 TAF1AQ15573 450 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 SPRED1Q7Z699 444 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 C17orf82Q86X59 251 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 SLC13A5Q86YT5 568 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 AVL9Q8NBF6 648 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 SLC35B2Q8TB61 432 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 TMEM74Q96NL1 305 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 APOL2Q9BQE5 337 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 TMEM121Q9BTD3 319 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 LRRC40Q9H9A6 602 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 IL26Q9NPH9 171 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 R3HDM2Q9Y2K5 976 aaKnown RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 RAXQ9Y2V3 346 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 PRKAB1Q9Y478 270 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 PLEKHM1Q9Y4G2 1056 aa17.45■□□□□ 0.38
HDAC4-211ENST00000494800 MAP1BP46821 2468 aaKnown RBP17.45■□□□□ 0.38
HDAC4-211ENST00000494800 EPG5Q9HCE0 2579 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 TAF4O00268 1085 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 KMOO15229 486 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 BRINP1O60477 761 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 CDK14O94921 469 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 MPOP05164 745 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF8P17098 575 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-211ENST00000494800 VCLP18206 1134 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 RBMS1P29558 406 aaKnown RBP17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ADRA1AP35348 466 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 EIF3IQ13347 325 aaKnown RBP17.44■□□□□ 0.38
HDAC4-211ENST00000494800 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-211ENST00000494800 INSCQ1MX18 579 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ATP13A5Q4VNC0 1218 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 LDLRAP1Q5SW96 308 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 FAM151BQ6UXP7 276 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ADGRG6Q86SQ4 1221 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 LRRTM4Q86VH4 590 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 NAGSQ8N159 534 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 WDR36Q8NI36 951 aaKnown RBP17.44■□□□□ 0.38
HDAC4-211ENST00000494800 MAIP1Q8WWC4 291 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ATXN7L3BQ96GX2 97 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ARFGAP3Q9NP61 516 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 KCNK6Q9Y257 313 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 PPP2R2CQ9Y2T4 447 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ENTPD2Q9Y5L3 495 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 ST14Q9Y5Y6 855 aa17.44■□□□□ 0.38
HDAC4-211ENST00000494800 CCDC187A0A096LP49 1063 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 TCRBV7S2A1N4TA0A589 114 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 OR5K4A6NMS3 321 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 RRP8O43159 456 aaKnown RBP17.43■□□□□ 0.38
HDAC4-211ENST00000494800 LIASO43766 372 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 INHBCP55103 352 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 MAP9Q49MG5 647 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 C3orf38Q5JPI3 329 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF438Q7Z4V0 828 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 SFTPA2Q8IWL1 248 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 SH3KBP1Q96B97 665 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ZNF578Q96N58 590 aaPredicted RBP17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 OSGEPL1Q9H4B0 414 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 EPB41L5Q9HCM4 733 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 SATB2Q9UPW6 733 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
HDAC4-211ENST00000494800 GOLGA4Q13439 2230 aaKnown RBP17.43■□□□□ 0.38
HDAC4-211ENST00000494800 A0A1W2PQM1 296 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CHUKO15111 745 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 BUD23O43709 281 aaKnown RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 SNX2O60749 519 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CPNE6O95741 557 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 GAS8O95995 478 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 HADHAP40939 763 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 FASLGP48023 281 aa17.42■□□□□ 0.38
HDAC4-211ENST00000494800 PPM1FP49593 454 aaPredicted RBP17.42■□□□□ 0.38
HDAC4-211ENST00000494800 CLCNKAP51800 687 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms