RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 HIC2Q96JB3 615 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 AGAP2Q99490 1192 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 RIOK2Q9BVS4 552 aaKnown RBP13.1□□□□□ -0.31
ERCC3-209ENST00000494464 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 VPS18Q9P253 973 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 APPL1Q9UKG1 709 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 ENTPD2Q9Y5L3 495 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 ADAMTS20P59510 1910 aa13.1□□□□□ -0.31
ERCC3-209ENST00000494464 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 B4DGG1 531 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 D6RAR5 112 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 USP12O75317 370 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 SASH3O75995 380 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 MT-CYBP00156 380 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 NFKB1P19838 968 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 LSSP48449 732 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 POLD2P49005 469 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 SLC7A5Q01650 507 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 CUL1Q13616 776 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 PCSK7Q16549 785 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 TBC1D25Q3MII6 688 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 DOK6Q6PKX4 331 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 TRIM74Q86UV6 250 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 C17orf82Q86X59 251 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 SPATA22Q8NHS9 363 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 SEC14L1Q92503 715 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 EID2BQ96D98 161 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 DDX47Q9H0S4 455 aaKnown RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 DPEP2Q9H4A9 486 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 POLR1BQ9H9Y6 1135 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 RAD18Q9NS91 495 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 TAAR2Q9P1P5 351 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-209ENST00000494464 ZNF711Q9Y462 761 aa13.09□□□□□ -0.31
ERCC3-209ENST00000494464 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 TLX3O43711 291 aaPredicted RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 EPOP01588 193 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 MYBL2P10244 700 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ACTN2P35609 894 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ADCY8P40145 1251 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 FNTAP49354 379 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 GABREP78334 506 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 GUCY2DQ02846 1103 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 LRP8Q14114 963 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 SIX1Q15475 284 aaPredicted RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 FAM182AQ5T1J6 154 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 KDELC1Q6UW63 502 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ZNF438Q7Z4V0 828 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 TMC3Q7Z5M5 1100 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 CCNJLQ8IV13 435 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ZNF567Q8N184 647 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 KRT222Q8N1A0 295 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 PRELID2Q8N945 189 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 FCRL5Q96RD9 977 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 OSBPL8Q9BZF1 889 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 RAB17Q9H0T7 212 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 SUDS3Q9H7L9 328 aaPredicted RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 SPATS2LQ9NUQ6 558 aaKnown RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 PCYOX1Q9UHG3 505 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 FAM153AQ9UHL3 310 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 TRHDEQ9UKU6 1024 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 CNOT6Q9ULM6 557 aaKnown RBP13.08□□□□□ -0.31
ERCC3-209ENST00000494464 PCDHGA8Q9Y5G5 932 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ST14Q9Y5Y6 855 aa13.08□□□□□ -0.31
ERCC3-209ENST00000494464 ZNF106Q9H2Y7 1883 aaKnown RBP13.08□□□□□ -0.32
ERCC3-209ENST00000494464 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
ERCC3-209ENST00000494464 LOC285095A0A1B0GVY8 99 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 A0A1W2PQM1 296 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
ERCC3-209ENST00000494464 INPP4BO15327 924 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 PMPCBO75439 489 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 MPOP05164 745 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 FGF1P05230 155 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
ERCC3-209ENST00000494464 AK4P27144 223 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-209ENST00000494464 EIF2S3P41091 472 aaKnown RBP13.07□□□□□ -0.32
ERCC3-209ENST00000494464 ERVPABLB-1P60509 514 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 CTBSQ01459 385 aa13.07□□□□□ -0.32
ERCC3-209ENST00000494464 CASP8Q14790 479 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms