RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ANXA6P08133 673 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ALPPL2P10696 532 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF8P17098 575 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-208ENST00000494334 KCNA4P22459 653 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ADRA1DP25100 572 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PSMA3P25788 255 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 NPY2RP49146 381 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PTK6Q13882 451 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PROX2Q3B8N5 592 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 KHDC1Q4VXA5 237 aaKnown RBP13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PYCR3Q53H96 274 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 MICALCLQ6ZW33 695 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ADGRG6Q86SQ4 1221 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 GKN2Q86XP6 184 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 NRROSQ86YC3 692 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PHYKPLQ8IUZ5 450 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 SDR16C5Q8N3Y7 309 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 SPATA4Q8NEY3 305 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 CDKN2AIPNLQ96HQ2 116 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 OR2AG1Q9H205 316 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ASB8Q9H765 288 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 TRNAU1APQ9NX07 287 aaKnown RBP13.41□□□□□ -0.26
COL1A1-208ENST00000494334 BFARQ9NZS9 450 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 FTSJ1Q9UET6 329 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 GPSM3Q9Y4H4 160 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 ST14Q9Y5Y6 855 aa13.41□□□□□ -0.26
COL1A1-208ENST00000494334 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 CCDC78A2IDD5 438 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 AGAP14A8MT82 685 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 CDK14O94921 469 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TUBB4AP04350 444 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 MC4RP32245 332 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ADCY8P40145 1251 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ARSDP51689 593 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SIM1P81133 766 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SARNPP82979 210 aaKnown RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 CTBSQ01459 385 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 DR1Q01658 176 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 NFATC2Q13469 925 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 PCID2Q5JVF3 399 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 GPRC6AQ5T6X5 926 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TSTD2Q5T7W7 516 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 LVRNQ6Q4G3 990 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SYDE1Q6ZW31 735 aaPredicted RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 CAND1Q86VP6 1230 aaKnown RBP13.4□□□□□ -0.26
COL1A1-208ENST00000494334 JAMLQ86YT9 394 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 GALNT13Q8IUC8 556 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 NAT8LQ8N9F0 302 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 FAM181AQ8N9Y4 354 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 MCUQ8NE86 351 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 DDHD1Q8NEL9 900 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 APOLD1Q96LR9 279 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF778Q96MU6 729 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 OR2M4Q96R27 311 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 KRT12Q99456 494 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 IL22Q9GZX6 179 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 CHRAC1Q9NRG0 131 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SMOXQ9NWM0 555 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TOR4AQ9NXH8 423 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ASIC3Q9UHC3 531 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ZNHIT2Q9UHR6 403 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 RIMKLBQ9ULI2 386 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 DOLKQ9UPQ8 538 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 PLEKHM1Q9Y4G2 1056 aa13.4□□□□□ -0.26
COL1A1-208ENST00000494334 ARID1BQ8NFD5 2236 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 LY6G6EA0A0G2JKS1 128 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 CHUKO15111 745 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 TTI1O43156 1089 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 GRID2O43424 1007 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 VEGFDO43915 354 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 AVILO75366 819 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 MYF5P13349 255 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 CKMT2P17540 419 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 IVDP26440 423 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 MGAT1P26572 445 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 AK4P27144 223 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 CRADDP78560 199 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 ACVR1Q04771 509 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 ILF3Q12906 894 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 LDLRAP1Q5SW96 308 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms