RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TMEM121Q9BTD3 319 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 IL26Q9NPH9 171 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 LRIT1Q9P2V4 623 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 PPP2R2CQ9Y2T4 447 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 PKP3Q9Y446 797 aa22.4■■□□□ 1.18
SNIP1-203ENST00000493916 GOLGA6L3A6NEY3 463 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 CASC3O15234 703 aaKnown RBP22.39■■□□□ 1.17
SNIP1-203ENST00000493916 ZNF8P17098 575 aaPredicted RBP22.39■■□□□ 1.17
SNIP1-203ENST00000493916 SPAM1P38567 509 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 PDX1P52945 283 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 GDF10P55107 478 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 NR1D2Q14995 579 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 SPRED1Q7Z699 444 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 ADGRG6Q86SQ4 1221 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 NAGSQ8N159 534 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 TRIM58Q8NG06 486 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 LRRC45Q96CN5 670 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 TBL1YQ9BQ87 522 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 OR2AG1Q9H205 316 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 FEZ2Q9UHY8 353 aaPredicted RBP22.39■■□□□ 1.17
SNIP1-203ENST00000493916 ASXL3Q9C0F0 2248 aa22.39■■□□□ 1.17
SNIP1-203ENST00000493916 GRID2O43424 1007 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 LIASO43766 372 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 VEGFDO43915 354 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 USP12O75317 370 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ECEL1O95672 775 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 RPLP0P05388 317 aaKnown RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 MAZP56270 477 aaKnown RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 CCL7P80098 99 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 OLIG2Q13516 323 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 TAF1AQ15573 450 aaPredicted RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 OASLQ15646 514 aaKnown RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 P3H1Q32P28 736 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ATP13A5Q4VNC0 1218 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 KCTD11Q693B1 232 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 CHST15Q7LFX5 561 aaPredicted RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ARL14Q8N4G2 192 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ATG4AQ8WYN0 398 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 GFM1Q96RP9 751 aaKnown RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 LRRN3Q9H3W5 708 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ARNT2Q9HBZ2 717 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ARFGAP3Q9NP61 516 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 TMPRSS11EQ9UL52 423 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 PRKAB1Q9Y478 270 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ENTPD2Q9Y5L3 495 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 AK5Q9Y6K8 562 aa22.38■■□□□ 1.17
SNIP1-203ENST00000493916 ANKRD11Q6UB99 2663 aaPredicted RBP22.38■■□□□ 1.17
SNIP1-203ENST00000493916 A0A1W2PQM1 296 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 D6RAR5 112 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 CHUKO15111 745 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 MSLNQ13421 630 aaPredicted RBP22.37■■□□□ 1.17
SNIP1-203ENST00000493916 ZNF648Q5T619 568 aaPredicted RBP22.37■■□□□ 1.17
SNIP1-203ENST00000493916 DENND5AQ6IQ26 1287 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 APOL2Q9BQE5 337 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 SYNDIG1Q9H7V2 258 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 ARL5AQ9Y689 179 aa22.37■■□□□ 1.17
SNIP1-203ENST00000493916 ZNF106Q9H2Y7 1883 aaKnown RBP22.37■■□□□ 1.17
SNIP1-203ENST00000493916 RP1P56715 2156 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 GLYATL1P3A0A0U1RQE8 302 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 C2orf81A6NN90 581 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 GAPDHSO14556 408 aaPredicted RBP22.36■■□□□ 1.17
SNIP1-203ENST00000493916 STX7O15400 261 aaKnown RBP22.36■■□□□ 1.17
SNIP1-203ENST00000493916 BRINP1O60477 761 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 METTL18O95568 372 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 ACP5P13686 325 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 LPOP22079 712 aaPredicted RBP22.36■■□□□ 1.17
SNIP1-203ENST00000493916 STIP1P31948 543 aaKnown RBP22.36■■□□□ 1.17
SNIP1-203ENST00000493916 CLCNKAP51800 687 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 FAM151BQ6UXP7 276 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 Q8N9G6 341 aaPredicted RBP22.36■■□□□ 1.17
SNIP1-203ENST00000493916 BRSK1Q8TDC3 778 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 PATE1Q8WXA2 126 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 ATXN7L3BQ96GX2 97 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 C19orf43Q9BQ61 176 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 LRRC40Q9H9A6 602 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 SMOXQ9NWM0 555 aa22.36■■□□□ 1.17
SNIP1-203ENST00000493916 RHPN2P1A8MT19 583 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 BUD23O43709 281 aaKnown RBP22.35■■□□□ 1.17
SNIP1-203ENST00000493916 DXOO77932 396 aaKnown RBP22.35■■□□□ 1.17
SNIP1-203ENST00000493916 GPR3P46089 330 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 LSSP48449 732 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 B4GALNT1Q00973 533 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 PDE1BQ01064 536 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 ITGA9Q13797 1035 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 CHRNA6Q15825 494 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 KHDC1Q4VXA5 237 aaKnown RBP22.35■■□□□ 1.17
SNIP1-203ENST00000493916 SFRP1Q8N474 314 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 TLR10Q9BXR5 811 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 POLR1BQ9H9Y6 1135 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 TBC1D29Q9UFV1 150 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 KCNK6Q9Y257 313 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 RAXQ9Y2V3 346 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 KNTC1P50748 2209 aa22.35■■□□□ 1.17
SNIP1-203ENST00000493916 DSPP15924 2871 aaKnown RBP22.34■■□□□ 1.17
SNIP1-203ENST00000493916 A6NCN8 305 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 TMX2-CTNND1H3BSU7 103 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 KMOO15229 486 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 PSMD3O43242 534 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 ZW10O43264 779 aa22.34■■□□□ 1.17
SNIP1-203ENST00000493916 MTX2O75431 263 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms