RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SEPHS1P49903 392 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 SEMA5AQ13591 1074 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 RALGPS1Q5JS13 557 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ZNF648Q5T619 568 aaPredicted RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 HENMT1Q5T8I9 393 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 FHL5Q5TD97 284 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 CPZQ66K79 652 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ZNF787Q6DD87 383 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 LYSMD3Q7Z3D4 306 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 SLC9B2Q86UD5 537 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 PSTKQ8IV42 348 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 SSC4DQ8WTU2 575 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 SH3KBP1Q96B97 665 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 OR6C1Q96RD1 312 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 HERPUD2Q9BSE4 406 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 TWSG1Q9GZX9 223 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ARFGAP3Q9NP61 516 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 NT5MQ9NPB1 228 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 ZNF624Q9P2J8 865 aaPredicted RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 RCOR3Q9P2K3 495 aaPredicted RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 CNOT8Q9UFF9 292 aaKnown RBP13.06□□□□□ -0.32
USF1-206ENST00000491629 SLC23A2Q9UGH3 650 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 MAP4K5Q9Y4K4 846 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
USF1-206ENST00000491629 KIR2DS5A0A0G2JLQ3 304 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 A0A0G2JNG1 304 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 A1L4Q6 167 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 TTLL8A6PVC2 850 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 KIR2DS3K7RE56 304 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 VPS4BO75351 444 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 SPAG6O75602 509 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
USF1-206ENST00000491629 NDUFA10O95299 355 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 FGF5P12034 268 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 NFKBIAP25963 317 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 SLC19A1P41440 591 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 DNASE1L3Q13609 305 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 KIR2DS5Q14953 304 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 SMTNL2Q2TAL5 461 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
USF1-206ENST00000491629 MARC1Q5VT66 337 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 TMEM26Q6ZUK4 368 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 PLXDC1Q8IUK5 500 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 CT55Q8WUE5 264 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 RSC1A1Q92681 617 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 EID2BQ96D98 161 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 TGM7Q96PF1 710 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 CSPG4P5Q96PW8 444 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 ZNF768Q9H5H4 540 aaKnown RBP13.05□□□□□ -0.32
USF1-206ENST00000491629 MLXIPLQ9NP71 852 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 ATXN10Q9UBB4 475 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 VPS4AQ9UN37 437 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 CHKBQ9Y259 395 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 OTOGQ6ZRI0 2925 aa13.05□□□□□ -0.32
USF1-206ENST00000491629 POLEQ07864 2286 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 PIPSLA2A3N6 862 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 GRID2O43424 1007 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 NUAK1O60285 661 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 PYGLP06737 847 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ZNF8P17098 575 aaPredicted RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 XRCC1P18887 633 aaPredicted RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 CLCNKAP51800 687 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ZNF135P52742 658 aaPredicted RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 CDH6P55285 790 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 PPP1CAP62136 330 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 RPS18P62269 152 aaKnown RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 DSC2Q02487 901 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 CHAF1BQ13112 559 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 BECN1Q14457 450 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 FAM182AQ5T1J6 154 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 FAM199XQ6PEV8 388 aaPredicted RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ATPAF2Q8N5M1 289 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.04□□□□□ -0.32
USF1-206ENST00000491629 ARRDC2Q8TBH0 407 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 TDRD1Q9BXT4 1180 aaKnown RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.04□□□□□ -0.32
USF1-206ENST00000491629 EPB41L1Q9H4G0 881 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 ZWILCHQ9H900 591 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 UCK1Q9HA47 277 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
USF1-206ENST00000491629 POLQO75417 2590 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 LGALS16A8MUM7 142 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 H3BRJ5 948 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms