RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CREG2Q8IUH2 290 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PNPLA1Q8N8W4 532 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 STYXQ8WUJ0 223 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 DNAJC1Q96KC8 554 aaKnown RBP16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 OR2AG1Q9H205 316 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ATXN10Q9UBB4 475 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 APPL1Q9UKG1 709 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TMPRSS11EQ9UL52 423 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GPR34Q9UPC5 381 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PCDHGA1Q9Y5H4 931 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 U3KQA8 63 aa16.12■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PCNX2A6NKB5 2137 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GPR39O43194 453 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 VEGFDO43915 354 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 NUAK1O60285 661 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A9O60656 530 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 MTX2O75431 263 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SRP72O76094 671 aaKnown RBP16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ECEL1O95672 775 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GPR89BP0CG08 455 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 MYF5P13349 255 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ZNF8P17098 575 aaPredicted RBP16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A6P19224 532 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TPSB2P20231 275 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A1P22309 533 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A4P22310 534 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CASQ1P31415 396 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A3P35503 534 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A5P35504 534 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PAFAH1B1P43034 410 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 RPIAP49247 311 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ETF1P62495 437 aaKnown RBP16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 XIAPP98170 497 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CDK16Q00536 496 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 FOXK2Q01167 660 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CTBSQ01459 385 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 LAMB3Q13751 1172 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TPSAB1Q15661 275 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CERCAMQ5T4B2 595 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 NRROSQ86YC3 692 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SLC35F3Q8IY50 421 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ARL10Q8N8L6 244 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 KYQ8NBH2 561 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GDAP1Q8TB36 358 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ADAMTS14Q8WXS8 1223 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A7Q9HAW7 530 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A10Q9HAW8 530 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 UGT1A8Q9HAW9 530 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 NLE1Q9NVX2 485 aaPredicted RBP16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SMOXQ9NWM0 555 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SIRPGQ9P1W8 387 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ZNHIT2Q9UHR6 403 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 NEU2Q9Y3R4 380 aa16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PCYT1BQ9Y5K3 369 aaPredicted RBP16.11■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 HEATR9A2RTY3 570 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 B4DGG1 531 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 AP3B1O00203 1094 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GRID2O43424 1007 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 AK4P27144 223 aaPredicted RBP16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TERF1P54274 439 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ILKQ13418 452 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 LRP8Q14114 963 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 KHDC1Q4VXA5 237 aaKnown RBP16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CCDC38Q502W7 563 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 LDLRAP1Q5SW96 308 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 RAB44Q7Z6P3 723 aaPredicted RBP16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 DDHD1Q8NEL9 900 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ZNF398Q8TD17 642 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 RANBP9Q96S59 729 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ZCCHC2Q9C0B9 1178 aaKnown RBP16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 DDX47Q9H0S4 455 aaKnown RBP16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ASB8Q9H765 288 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TAAR2Q9P1P5 351 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GULP1Q9UBP9 304 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PRKAB1Q9Y478 270 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PLEKHM1Q9Y4G2 1056 aa16.1■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 MROH6A6NGR9 719 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 H7C0S8 307 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CCL22O00626 93 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CHUKO15111 745 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CDK14O94921 469 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CDK4P11802 303 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ITGALP20701 1170 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 MC4RP32245 332 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CA5AP35218 305 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ACTR1BP42025 376 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 MAGEA6P43360 314 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ACTR1AP61163 376 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TMEM115Q12893 351 aaPredicted RBP16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 NFATC2Q13469 925 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PEX6Q13608 980 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GTF2H3Q13889 308 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 KCNJ11Q14654 390 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 PPP1R7Q15435 360 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GPRC6AQ5T6X5 926 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 GUSBP11Q6P575 273 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms