RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 OAS3Q9Y6K5 1087 aaKnown RBP20.59■□□□□ 0.89
NELFE-210ENST00000491139 TMCO5BA8MYB1 307 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 LRCH4O75427 683 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 CREG1O75629 220 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 KIAA0754O94854 1291 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 NDUFA10O95299 355 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 RECKO95980 971 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 MBD3O95983 291 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 C9P02748 559 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 CCNYL3P0C7X3 344 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 ITKQ08881 620 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 RBM43Q6ZSC3 357 aaKnown RBP20.58■□□□□ 0.89
NELFE-210ENST00000491139 CPT1CQ8TCG5 803 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 NT5MQ9NPB1 228 aa20.58■□□□□ 0.89
NELFE-210ENST00000491139 CNOT6Q9ULM6 557 aaKnown RBP20.58■□□□□ 0.89
NELFE-210ENST00000491139 ENO4A6NNW6 628 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 TOX3O15405 576 aaPredicted RBP20.57■□□□□ 0.88
NELFE-210ENST00000491139 PDGFAP04085 211 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 ATP1A3P13637 1013 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 FERP16591 822 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 SEPHS1P49903 392 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 SH3BP2P78314 561 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 DPYSL2Q16555 572 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 PHYKPLQ8IUZ5 450 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 APLFQ8IW19 511 aaPredicted RBP20.57■□□□□ 0.88
NELFE-210ENST00000491139 RAVER1Q8IY67 606 aaKnown RBP20.57■□□□□ 0.88
NELFE-210ENST00000491139 ELMO2Q96JJ3 720 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 TGM7Q96PF1 710 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 PLEKHG4BQ96PX9 1271 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 TRIM7Q9C029 511 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 UCK1Q9HA47 277 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 LNPEPQ9UIQ6 1025 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 PADI1Q9ULC6 663 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 PCDHGA6Q9Y5G7 932 aa20.57■□□□□ 0.88
NELFE-210ENST00000491139 SPENQ96T58 3664 aaKnown RBP20.57■□□□□ 0.88
NELFE-210ENST00000491139 GRID2O43424 1007 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 TYRP1P17643 537 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 CASP14P31944 242 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 GARSP41250 739 aaKnown RBP20.56■□□□□ 0.88
NELFE-210ENST00000491139 UBE2IP63279 158 aaKnown RBP20.56■□□□□ 0.88
NELFE-210ENST00000491139 POLNQ7Z5Q5 900 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 POLR1EQ9GZS1 481 aaKnown RBP20.56■□□□□ 0.88
NELFE-210ENST00000491139 OGFRQ9NZT2 677 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 HIVEP3Q5T1R4 2406 aa20.56■□□□□ 0.88
NELFE-210ENST00000491139 TEP1Q99973 2627 aaKnown RBP20.56■□□□□ 0.88
NELFE-210ENST00000491139 RASSF9O75901 435 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 DNAJB5O75953 348 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 UBXN7O94888 489 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 CLDN7O95471 211 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 MT-ND3P03897 115 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 AMD1P17707 334 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 SERPINB6P35237 376 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 UBXN1Q04323 297 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 SEMA5AQ13591 1074 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 DNASE1L3Q13609 305 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 TMEM26Q6ZUK4 368 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 TEX26Q8N6G2 289 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 ANKRD20A12PQ8NF67 263 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 CSPG4P5Q96PW8 444 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 CARD9Q9H257 536 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 ZNF768Q9H5H4 540 aaKnown RBP20.55■□□□□ 0.88
NELFE-210ENST00000491139 FANCLQ9NW38 375 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 CUEDC1Q9NWM3 386 aaPredicted RBP20.55■□□□□ 0.88
NELFE-210ENST00000491139 CHKBQ9Y259 395 aa20.55■□□□□ 0.88
NELFE-210ENST00000491139 GOLGA6L3A6NEY3 463 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 LGALS16A8MUM7 142 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 FADS2P1A8MWK0 482 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 NUAK1O60285 661 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 SPAG6O75602 509 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 VIPP01282 170 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 FGF5P12034 268 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 XRCC1P18887 633 aaPredicted RBP20.54■□□□□ 0.88
NELFE-210ENST00000491139 PCK1P35558 622 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 CLCNKAP51800 687 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 SMTNL2Q2TAL5 461 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 BOLA3Q53S33 107 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 IRF2BP2Q7Z5L9 587 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 LRRC49Q8IUZ0 686 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 TRIM48Q8IWZ4 208 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 AOPEPQ8N6M6 819 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 HSPH1Q92598 858 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 WDR24Q96S15 920 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 SYT11Q9BT88 431 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 TRIM55Q9BYV6 548 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 OSGEPL1Q9H4B0 414 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 FAM83DQ9H4H8 585 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 KLC4Q9NSK0 619 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 SLC30A1Q9Y6M5 507 aa20.54■□□□□ 0.88
NELFE-210ENST00000491139 TNRC6AQ8NDV7 1962 aaKnown RBP20.54■□□□□ 0.88
NELFE-210ENST00000491139 SHANK1Q9Y566 2161 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 C21orf140B9A014 251 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 SEMA7AO75326 666 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 CES1P23141 567 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 IL1R2P27930 398 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 LEPRP48357 1165 aaKnown RBP20.53■□□□□ 0.88
NELFE-210ENST00000491139 SPINT3P49223 89 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 PGDP52209 483 aa20.53■□□□□ 0.88
NELFE-210ENST00000491139 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.53■□□□□ 0.88
NELFE-210ENST00000491139 HENMT1Q5T8I9 393 aaKnown RBP20.53■□□□□ 0.88
NELFE-210ENST00000491139 PPP1R3BQ86XI6 285 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms