RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 NLRP4Q96MN2 994 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TGS1Q96RS0 853 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FNBP1Q96RU3 617 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CYTH2Q99418 400 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TSC22D3Q99576 134 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PAIP2Q9BPZ3 127 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SIKE1Q9BRV8 207 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX23Q9BUQ8 820 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 MAK16Q9BXY0 300 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 GCOM2Q9BZD3 368 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ASPSCR1Q9BZE9 553 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PRSS22Q9GZN4 317 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM192AQ9GZU8 254 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 LRMDAQ9H2I8 198 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 RANBP17Q9H2T7 1088 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 VCX3BQ9H321 246 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 UNC45AQ9H3U1 944 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 GOLPH3Q9H4A6 298 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM96AQ9H5X1 160 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM124BQ9H5Z6 455 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 RNPEPL1Q9HAU8 725 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 AGO4Q9HCK5 861 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 VCX3AQ9NNX9 186 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PNPLA8Q9NP80 782 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX4Q9NQI0 724 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PAPOLBQ9NRJ5 636 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SNX15Q9NRS6 342 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 FGFR1OP2Q9NVK5 253 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 HOXC10Q9NYD6 342 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 EURLQ9NYK6 297 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP39A1Q9NYL5 469 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TAS2R14Q9NYV8 317 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TAS2R1Q9NYW7 299 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 NINJ2Q9NZG7 142 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 IL1RAPL1Q9NZN1 696 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TMOD4Q9NZQ9 345 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 PDP2Q9P2J9 529 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 WDR35Q9P2L0 1181 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 STX18Q9P2W9 335 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 HEY2Q9UBP5 337 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SERGEFQ9UGK8 458 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SRP68Q9UHB9 627 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ASIC3Q9UHC3 531 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 TBK1Q9UHD2 729 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 DCDC2Q9UHG0 476 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 BCAP29Q9UHQ4 241 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 HAO1Q9UJM8 370 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 NOCTQ9UK39 431 aaKnown RBP2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ITGB1BP2Q9UKP3 347 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 GRID1Q9ULK0 1009 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 MAFFQ9ULX9 164 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SH2B3Q9UQQ2 575 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SSX2IPQ9Y2D8 614 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 BTBD3Q9Y2F9 522 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 STK38LQ9Y2H1 464 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 STYXL1Q9Y6J8 313 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 IKBKGQ9Y6K9 419 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 SCINQ9Y6U3 715 aa2.09□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNFX1Q9P2E3 1918 aaKnown RBP2.09□□□□□ -2.08
SNRNP40-207ENST00000491106 COL5A3P25940 1745 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 EVPLQ92817 2033 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SBF2Q86WG5 1849 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SLIT2O94813 1529 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NAV1Q8NEY1 1877 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 EXOC1LA0A1B0GW35 172 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 A0A1W2PPM1 405 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MAGEB16A2A368 324 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DENND3A2RUS2 1198 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SMIM23A6NLE4 172 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 C19orf81C9J6K1 198 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KBTBD13C9JR72 458 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ANKRD63C9JTQ0 380 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 E7ESA3 106 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 RAB27BO00194 218 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SOCS2O14508 198 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC16A4O15374 487 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NVLO15381 856 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PHGDHO43175 533 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MED7O43513 233 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LIASO43766 372 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMG1O95456 288 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GH2P01242 217 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 FGBP02675 491 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ICAM1P05362 532 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SERPINA6P08185 405 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ASNSP08243 561 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CD63P08962 238 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DHRS4L1P0CG22 281 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CBSLP0DN79 551 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TGFB3P10600 412 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 RALAP11233 206 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CYP2A6P11509 494 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KRT3P12035 628 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MYL4P12829 197 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KRT5P13647 590 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GYS1P13807 737 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HOXB6P17509 224 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ITGB6P18564 788 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MMP8P22894 467 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PAX7P23759 505 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms