RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TMEM9Q9P0T7 183 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 TBC1D29Q9UFV1 150 aa19.53■□□□□ 0.72
SREBF1-216ENST00000490796 SETXQ7Z333 2677 aaKnown RBP19.52■□□□□ 0.72
SREBF1-216ENST00000490796 SSU72P8A0A1W2PR75 194 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 OR5K4A6NMS3 321 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 A8MU76 341 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 FADS2P1A8MWK0 482 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 GRID2O43424 1007 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 KRT1P04264 644 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 ZBTB17Q13105 803 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-216ENST00000490796 ALS2CLQ60I27 953 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 IYDQ6PHW0 289 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 NT5DC3Q86UY8 548 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 RFX6Q8HWS3 928 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 EXD3Q8N9H8 876 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 SLC35G2Q8TBE7 412 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 CCDC42Q96M95 316 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 AGAP3Q96P47 875 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 GPR63Q9BZJ6 419 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 CARD9Q9H257 536 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 CNOT6Q9ULM6 557 aaKnown RBP19.52■□□□□ 0.72
SREBF1-216ENST00000490796 B3GALT1Q9Y5Z6 326 aa19.52■□□□□ 0.72
SREBF1-216ENST00000490796 KIR2DS5A0A0G2JLQ3 304 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 A0A0G2JNG1 304 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 ZNF487B1APH4 448 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 B4E171 279 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 KIR2DS3K7RE56 304 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 NUAK1O60285 661 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 MTA2O94776 668 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 SLC25A14O95258 325 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-216ENST00000490796 EML2O95834 649 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 MMP2P08253 660 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 TNNT1P13805 278 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 TSPAN7P41732 249 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 ARHGAP25P42331 645 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 KIR2DS5Q14953 304 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 PCSK7Q16549 785 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 LINC00303Q3SY05 128 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 RHOT2Q8IXI1 618 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 CACNA2D3Q8IZS8 1091 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 PLD5Q8N7P1 536 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 NKD1Q969G9 470 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 TEFMQ96QE5 360 aaKnown RBP19.51■□□□□ 0.71
SREBF1-216ENST00000490796 WDR24Q96S15 920 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 DNAJC7Q99615 494 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 ZSCAN5AQ9BUG6 496 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 CEP41Q9BYV8 373 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 OSGEPL1Q9H4B0 414 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 OCIAD1Q9NX40 245 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 SHOC2Q9UQ13 582 aa19.51■□□□□ 0.71
SREBF1-216ENST00000490796 TLN1Q9Y490 2541 aaKnown RBP19.51■□□□□ 0.71
SREBF1-216ENST00000490796 ZFC3H1O60293 1989 aaKnown RBP19.5■□□□□ 0.71
SREBF1-216ENST00000490796 FAM87AP0C7U9 286 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 PIRTP0C851 137 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 F3P13726 295 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 UGT1A3P35503 534 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-216ENST00000490796 CYP4F2P78329 520 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 CDK18Q07002 472 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 TBR1Q16650 682 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 SLC9A4Q6AI14 798 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 WDR74Q6RFH5 385 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-216ENST00000490796 TRIM48Q8IWZ4 208 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 CNTD1Q8N815 330 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 PMEPA1Q969W9 287 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 BRD8Q9H0E9 1235 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 OR2AG1Q9H205 316 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 EPB41L1Q9H4G0 881 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 ARFGAP3Q9NP61 516 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 ATXN10Q9UBB4 475 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 KLHL3Q9UH77 587 aa19.5■□□□□ 0.71
SREBF1-216ENST00000490796 PCYT1BQ9Y5K3 369 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-216ENST00000490796 SDK2Q58EX2 2172 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 RAD1O60671 282 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 EPHA4P54764 986 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 DYNLT1P63172 113 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 INSCQ1MX18 579 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 ASTE1Q2TB18 679 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 ANKS6Q68DC2 871 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 CEACAM20Q6UY09 585 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 BZW1Q7L1Q6 419 aaKnown RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 VSIG1Q86XK7 387 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 KIAA1143Q96AT1 154 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 RNF25Q96BH1 459 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 IMP4Q96G21 291 aaKnown RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 SRPK1Q96SB4 655 aaKnown RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 SLC25A51Q9H1U9 297 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 MAGEE1Q9HCI5 957 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 TRIM39Q9HCM9 518 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 KLC4Q9NSK0 619 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 DDX56Q9NY93 547 aaKnown RBP19.49■□□□□ 0.71
SREBF1-216ENST00000490796 CPNE7Q9UBL6 633 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 ZNF711Q9Y462 761 aa19.49■□□□□ 0.71
SREBF1-216ENST00000490796 GPR89AB7ZAQ6 455 aa19.48■□□□□ 0.71
SREBF1-216ENST00000490796 GPR89BP0CG08 455 aa19.48■□□□□ 0.71
SREBF1-216ENST00000490796 ZNF8P17098 575 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-216ENST00000490796 WT1P19544 449 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-216ENST00000490796 PDPK2PQ6A1A2 396 aa19.48■□□□□ 0.71
SREBF1-216ENST00000490796 CRTC3Q6UUV7 619 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms