RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MARCH4Q9P2E8 410 aaPredicted RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.14□□□□□ -0.31
SNX12-205ENST00000490561 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 A0A1W2PPC4 97 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 CXorf49A8MYA2 514 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 CACNB4O00305 520 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 SLC31A1O15431 190 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KRT37O76014 449 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 AP2A2O94973 939 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 S1PR4O95977 384 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 MSH3P20585 1137 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KELP23276 732 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 RPS3P23396 243 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNX12-205ENST00000490561 CD27P26842 260 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 TRIM23P36406 574 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 DPP6P42658 865 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KIAA1024LP59773 190 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 YPEL5P62699 121 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 DMWDQ09019 674 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 GTF2H3Q13889 308 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 DBN1Q16643 649 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 UBAP2Q5T6F2 1119 aaKnown RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 GPRC6AQ5T6X5 926 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 ADGRD1Q6QNK2 874 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 TSSK4Q6SA08 328 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KYAT3Q6YP21 454 aaKnown RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 DENND6AQ8IWF6 608 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 PIANPQ8IYJ0 282 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KLK6Q92876 244 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 MTBPQ96DY7 904 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 KLF6Q99612 283 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 RBBP8Q99708 897 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 TEX101Q9BY14 249 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 CLPBQ9H078 707 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 STMN4Q9H169 189 aaPredicted RBP13.13□□□□□ -0.31
SNX12-205ENST00000490561 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 RHOJQ9H4E5 214 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 FAM96AQ9H5X1 160 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 NFS1Q9Y697 457 aa13.13□□□□□ -0.31
SNX12-205ENST00000490561 A6NNZ2 444 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 FADS2P1A8MWK0 482 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 PRMT5O14744 637 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 GALR2O43603 387 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 VEGFDO43915 354 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A9O60656 530 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 SLC25A14O95258 325 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 SOD1P00441 154 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 AHSGP02765 367 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 ESR1P03372 595 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 SHBGP04278 402 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A6P19224 532 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A1P22309 533 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A4P22310 534 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 ATP5DP30049 168 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 AKT1P31749 480 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A3P35503 534 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A5P35504 534 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 IGFALSP35858 605 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 RABIFP47224 123 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 LIMK2P53671 638 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 CDK3Q00526 305 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 CTBP1Q13363 440 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 INPP5AQ14642 412 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 EFTUD2Q15029 972 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNX12-205ENST00000490561 ANGPT1Q15389 498 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 DCP2Q8IU60 420 aaKnown RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 TMEM145Q8NBT3 493 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 SNX19Q92543 992 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 COX14Q96I36 57 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 SERAC1Q96JX3 654 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 PRRX2Q99811 253 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A7Q9HAW7 530 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A10Q9HAW8 530 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UGT1A8Q9HAW9 530 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 TRIM39Q9HCM9 518 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 MBNL1Q9NR56 388 aaKnown RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 FBXO6Q9NRD1 293 aaPredicted RBP13.12□□□□□ -0.31
SNX12-205ENST00000490561 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 NCOR1O75376 2440 aa13.12□□□□□ -0.31
SNX12-205ENST00000490561 UBA6A0AVT1 1052 aaPredicted RBP13.11□□□□□ -0.31
SNX12-205ENST00000490561 MAP2K7O14733 419 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms