RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OR4D9Q8NGE8 314 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 SPATA22Q8NHS9 363 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TTC9Q92623 222 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 NAF1Q96HR8 494 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 SRPK1Q96SB4 655 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 VAT1Q99536 393 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CMKLR1Q99788 373 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 DPYSL5Q9BPU6 564 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 NUDT22Q9BRQ3 303 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CEP41Q9BYV8 373 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CARD9Q9H257 536 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 RDH14Q9HBH5 336 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TRIM39Q9HCM9 518 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 SARS2Q9NP81 518 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 RAD18Q9NS91 495 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 ATXN10Q9UBB4 475 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TBC1D29Q9UFV1 150 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 LOXL2Q9Y4K0 774 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 TTLL3Q9Y4R7 772 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
TMEM39A-210ENST00000490099 hCG_1818297A0A087WSY0 165 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GOLGA6BA6NDN3 693 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ERVH48-1M5A8F1 160 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 INPP4BO15327 924 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZW10O43264 779 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 SPOPO43791 374 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 MT-CYBP00156 380 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ATP1A1P05023 1023 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 BPIP17213 487 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ITIH1P19827 911 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 CD82P27701 267 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ALDH4A1P30038 563 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 CSF2RBP32927 897 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 HMGCLP35914 325 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 CXADRP78310 365 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GPLD1P80108 840 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 XRCC4Q13426 336 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GALNT3Q14435 633 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 PPP2R5EQ16537 467 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 TFDP3Q5H9I0 405 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZFYVE27Q5T4F4 411 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 DOK6Q6PKX4 331 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 WDR74Q6RFH5 385 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 BBS12Q6ZW61 710 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 B4GALNT4Q76KP1 1039 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 RFX6Q8HWS3 928 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 TRAM1L1Q8N609 369 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 SLC37A2Q8TED4 501 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 MRFAP1L1Q96HT8 127 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 CCNL2Q96S94 520 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 SPRY4Q9C004 299 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 TRIM5Q9C035 493 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 UCK1Q9HA47 277 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GRPEL1Q9HAV7 217 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 EPN1Q9Y6I3 576 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 ZFC3H1O60293 1989 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-210ENST00000490099 SMG1Q96Q15 3661 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 OR5K4A6NMS3 321 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 BTNL10A8MVZ5 291 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 HACD1B0YJ81 288 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 B4E171 279 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 AURKAO14965 403 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 GRID2O43424 1007 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ASMTLO95671 621 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 PIRTP0C851 137 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 JMJD7P0C870 316 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 THRAP10827 490 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 FGF3P11487 239 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 CCL4P13236 92 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 F3P13726 295 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 TSPAN7P41732 249 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 ZNF75DP51815 510 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 WNT3AP56704 352 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 COPS2P61201 443 aa9.61□□□□□ -0.87
TMEM39A-210ENST00000490099 UBE2IP63279 158 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms