RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CPNE5Q9HCH3 593 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 UBP1Q9NZI7 540 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 FAM153AQ9UHL3 310 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 PRKAB1Q9Y478 270 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 SPO11Q9Y5K1 396 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
SRRM1-216ENST00000489130 EPN1Q9Y6I3 576 aaPredicted RBP12.43□□□□□ -0.42
SRRM1-216ENST00000489130 ARHGEF17Q96PE2 2063 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 HACD1B0YJ81 288 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TK2O00142 265 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 HGSO14964 777 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 GRID2O43424 1007 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 EPOP01588 193 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 APOC2P02655 101 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 SLC4A1P02730 911 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ACP5P13686 325 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ZNF8P17098 575 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 BPIP17213 487 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 NFKB1P19838 968 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 CSF2RBP32927 897 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 CTNNA1P35221 906 aaKnown RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 COPS2P61201 443 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 VAC14Q08AM6 782 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.421e-9■■■■□ 22.9
SRRM1-216ENST00000489130 COL9A2Q14055 689 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 C16orf72Q14CZ0 275 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 KIF26BQ2KJY2 2108 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ALS2CLQ60I27 953 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 KDELC1Q6UW63 502 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 USP53Q70EK8 1073 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 DAAM2Q86T65 1068 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TMTC1Q8IUR5 882 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ZNF567Q8N184 647 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 LSM14AQ8ND56 463 aaKnown RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 OR4D9Q8NGE8 314 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 HTR3CQ8WXA8 447 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 GLYATL1Q969I3 302 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 HAUS1Q96CS2 278 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 FCRL5Q96RD9 977 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 DPYSL5Q9BPU6 564 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 HERPUD2Q9BSE4 406 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 B3GNT4Q9C0J1 378 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TRABDQ9H4I3 376 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TRIM39Q9HCM9 518 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 KCNK4Q9NYG8 393 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 KLHL8Q9P2G9 620 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-216ENST00000489130 ATXN10Q9UBB4 475 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 TBC1D29Q9UFV1 150 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
SRRM1-216ENST00000489130 BTNL10A8MVZ5 291 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 K7ENP7 123 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 ERVH48-1M5A8F1 160 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 AURKAO14965 403 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 CHUKO15111 745 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 SLC25A14O95258 325 aaPredicted RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 F3P13726 295 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 HMGCLP35914 325 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 ETV5P41161 510 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 CLCNKAP51800 687 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 LIMK2P53671 638 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 WNT3AP56704 352 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 HHEXQ03014 270 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 CFHR1Q03591 330 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 MPP3Q13368 585 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 XRCC4Q13426 336 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 NOMO1Q15155 1222 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 ARHGAP40Q5TG30 622 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 NKAIN2Q5VXU1 208 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 IYDQ6PHW0 289 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 INO80CQ6PI98 192 aaPredicted RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 ADGRG6Q86SQ4 1221 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 OXNAD1Q96HP4 312 aaPredicted RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 CCDC74BQ96LY2 380 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 VPS35Q96QK1 796 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 SLC38A3Q99624 504 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 OR2AG1Q9H205 316 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 SARS2Q9NP81 518 aaKnown RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 AKAP7Q9P0M2 348 aaPredicted RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 TRHDEQ9UKU6 1024 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 REXO2Q9Y3B8 237 aaKnown RBP12.41□□□□□ -0.42
SRRM1-216ENST00000489130 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 DUSP10Q9Y6W6 482 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
SRRM1-216ENST00000489130 KIR2DS5A0A0G2JLQ3 304 aa12.4□□□□□ -0.42
SRRM1-216ENST00000489130 PRAMEF33A0A0G2JMD5 474 aa12.4□□□□□ -0.42
SRRM1-216ENST00000489130 A0A0G2JNG1 304 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms