RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 INHBCP55103 352 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 OR1D5P58170 312 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 EIF3EP60228 445 aaKnown RBP24.74■■□□□ 1.55
HMGN1-217ENST00000489072 ERVPABLB-1P60509 514 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 CCDC173Q0VFZ6 552 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 MPP3Q13368 585 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 PEX6Q13608 980 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 SLC1A5Q15758 541 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 FOXR1Q6PIV2 292 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 CHST15Q7LFX5 561 aaPredicted RBP24.74■■□□□ 1.55
HMGN1-217ENST00000489072 PEX26Q7Z412 305 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 CDKL3Q8IVW4 592 aaPredicted RBP24.74■■□□□ 1.55
HMGN1-217ENST00000489072 GLYATL1Q969I3 302 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 RMI1Q9H9A7 625 aa24.74■■□□□ 1.55
HMGN1-217ENST00000489072 PPM1DO15297 605 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 DDX3YO15523 660 aaKnown RBP24.73■■□□□ 1.55
HMGN1-217ENST00000489072 RRP8O43159 456 aaKnown RBP24.73■■□□□ 1.55
HMGN1-217ENST00000489072 NUAK1O60285 661 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 SLC25A14O95258 325 aaPredicted RBP24.73■■□□□ 1.55
HMGN1-217ENST00000489072 FTCDO95954 541 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 RBP3P10745 1247 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 ZNF8P17098 575 aaPredicted RBP24.73■■□□□ 1.55
HMGN1-217ENST00000489072 CCKBRP32239 447 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 PDPK2PQ6A1A2 396 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 LRRC69Q6ZNQ3 347 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 PDZD3Q86UT5 571 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 OR2AG1Q9H205 316 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 CARD9Q9H257 536 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 TMPRSS11EQ9UL52 423 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 KCNK6Q9Y257 313 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 ADGRG1Q9Y653 693 aa24.73■■□□□ 1.55
HMGN1-217ENST00000489072 TJP3O95049 919 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 ACP5P13686 325 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 HLA-DPA1P20036 260 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 RBMS1P29558 406 aaKnown RBP24.72■■□□□ 1.55
HMGN1-217ENST00000489072 ALDH4A1P30038 563 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 HMGCLP35914 325 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 CETN2P41208 172 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 PCBP4P57723 403 aaKnown RBP24.72■■□□□ 1.55
HMGN1-217ENST00000489072 ZFP36L1Q07352 338 aaKnown RBP24.72■■□□□ 1.55
HMGN1-217ENST00000489072 AMZ1Q400G9 498 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 ADGRG6Q86SQ4 1221 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 SLC37A2Q8TED4 501 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 TMEM74Q96NL1 305 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 PLEKHG4BQ96PX9 1271 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 TRABDQ9H4I3 376 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 TRIM39Q9HCM9 518 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 THSD1Q9NS62 852 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 TBC1D29Q9UFV1 150 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 CAPN6Q9Y6Q1 641 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 AHCTF1Q8WYP5 2266 aa24.72■■□□□ 1.55
HMGN1-217ENST00000489072 TRBV23OR9-2A0A075B6M9 112 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 CDRT15L2A8MXV6 281 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 KCNN4O15554 427 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 GRID2O43424 1007 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 AGTP01019 485 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 KHDC1Q4VXA5 237 aaKnown RBP24.71■■□□□ 1.55
HMGN1-217ENST00000489072 ANKRD20A2Q5SQ80 823 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 ANKRD20A1Q5TYW2 823 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 ANKRD20A3Q5VUR7 823 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 ITPRIPL1Q6GPH6 555 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 DARS2Q6PI48 645 aaKnown RBP24.71■■□□□ 1.55
HMGN1-217ENST00000489072 SLITRK4Q8IW52 837 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 SYCE1Q8N0S2 351 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 TXLNBQ8N3L3 684 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 ZNF248Q8NDW4 579 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 BLOC1S5Q8TDH9 187 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 NAF1Q96HR8 494 aaKnown RBP24.71■■□□□ 1.55
HMGN1-217ENST00000489072 FICDQ9BVA6 458 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 RDH14Q9HBH5 336 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 IL17CQ9P0M4 197 aa24.71■■□□□ 1.55
HMGN1-217ENST00000489072 MIF4GDA9UHW6 222 aaKnown RBP24.7■■□□□ 1.54
HMGN1-217ENST00000489072 TMX2-CTNND1H3BSU7 103 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 PLD2O14939 933 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 MTX2O75431 263 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 TNFSF15O95150 251 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 PSMB4P28070 264 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 TNNT3P45378 269 aaPredicted RBP24.7■■□□□ 1.54
HMGN1-217ENST00000489072 GEMP55040 296 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 OLIG2Q13516 323 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 ATP13A5Q4VNC0 1218 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 RAB11FIP2Q7L804 512 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 PHYKPLQ8IUZ5 450 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 SPACA3Q8IXA5 215 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 SFRP1Q8N474 314 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 UBL4BQ8N7F7 174 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 NUDT22Q9BRQ3 303 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 FSD1LQ9BXM9 530 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 STRADBQ9C0K7 418 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 SEMA6CQ9H3T2 930 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 IL26Q9NPH9 171 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 HACD3Q9P035 362 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 MGAQ8IWI9 3026 aa24.7■■□□□ 1.54
HMGN1-217ENST00000489072 A6NCN8 305 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 CHUKO15111 745 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 BUD23O43709 281 aaKnown RBP24.69■■□□□ 1.54
HMGN1-217ENST00000489072 ANXA9O76027 345 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 CPNE6O95741 557 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 HGFP14210 728 aa24.69■■□□□ 1.54
HMGN1-217ENST00000489072 CD1CP29017 333 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms