RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 LMAN1P49257 510 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CAMK2BQ13554 666 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 SNX1Q13596 522 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CERCAMQ5T4B2 595 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CDCP2Q5VXM1 449 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 NRROSQ86YC3 692 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CCDC89Q8N998 374 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 DTX3LQ8TDB6 740 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 PTCD2Q8WV60 388 aaKnown RBP14.14□□□□□ -0.15
BRCA1-218ENST00000489037 C1orf54Q8WWF1 131 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 ATG4AQ8WYN0 398 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 VPS35Q96QK1 796 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 GFM1Q96RP9 751 aaKnown RBP14.14□□□□□ -0.15
BRCA1-218ENST00000489037 ZCCHC2Q9C0B9 1178 aaKnown RBP14.14□□□□□ -0.15
BRCA1-218ENST00000489037 NRSN2Q9GZP1 204 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 LRRC40Q9H9A6 602 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 LRIT1Q9P2V4 623 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 ATXN10Q9UBB4 475 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 IGF2RP11717 2491 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CACNA1BQ00975 2339 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 E7EVH7 732 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 TMX2-CTNND1H3BSU7 103 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 BUD23O43709 281 aaKnown RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 NUDT21O43809 227 aaKnown RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 CEP104O60308 925 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 DNAJC6O75061 913 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 CDK14O94921 469 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ACP5P13686 325 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF8P17098 575 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 FDFT1P37268 417 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 GDF10P55107 478 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 CYP4F3Q08477 520 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 SPARCL1Q14515 664 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 HLTFQ14527 1009 aaKnown RBP eCLIP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 LONRF2Q1L5Z9 754 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 LDLRAP1Q5SW96 308 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 FAM151BQ6UXP7 276 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 LINC00523Q86TU6 105 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 LRRTM4Q86VH4 590 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 CCNJLQ8IV13 435 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 Q8N9G6 341 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 GORASP1Q9BQQ3 440 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 STN1Q9H668 368 aaKnown RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ARNT2Q9HBZ2 717 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ARFGAP3Q9NP61 516 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 IL26Q9NPH9 171 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 HOMER3Q9NSC5 361 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 APPL1Q9UKG1 709 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ZMIZ1Q9ULJ6 1067 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 ZKSCAN5Q9Y2L8 839 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 PRKAB1Q9Y478 270 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 PLEKHM1Q9Y4G2 1056 aa14.13□□□□□ -0.15
BRCA1-218ENST00000489037 URB1O60287 2271 aaKnown RBP14.13□□□□□ -0.15
BRCA1-218ENST00000489037 KIF26BQ2KJY2 2108 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ERI2A8K979 691 aaKnown RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 KMOO15229 486 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 USP12O75317 370 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 METTL18O95568 372 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ECEL1O95672 775 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 FGGP02679 453 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 RPLP0P05388 317 aaKnown RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 VCLP18206 1134 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 HADHAP40939 763 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 MAZP56270 477 aaKnown RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 CCL7P80098 99 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 OASLQ15646 514 aaKnown RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 CHRNA6Q15825 494 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 CCNG2Q16589 344 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 INSCQ1MX18 579 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ISXQ2M1V0 245 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ATP13A5Q4VNC0 1218 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF648Q5T619 568 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 GSTA5Q7RTV2 222 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ADGRG6Q86SQ4 1221 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ARL14Q8N4G2 192 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 TAB3Q8N5C8 712 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-218ENST00000489037 OR4K2Q8NGD2 314 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 MDM1Q8TC05 714 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF398Q8TD17 642 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 RTP4Q96DX8 246 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 TLR10Q9BXR5 811 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 LRRN3Q9H3W5 708 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 JRKLQ9Y4A0 524 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 ARL5AQ9Y689 179 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 RNF215Q9Y6U7 377 aa14.12□□□□□ -0.15
BRCA1-218ENST00000489037 EPG5Q9HCE0 2579 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 SNX2O60749 519 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 AP2A1O95782 977 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 PPM1FP49593 454 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-218ENST00000489037 TMEM115Q12893 351 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-218ENST00000489037 OLIG2Q13516 323 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 RTP5Q14D33 572 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 KCTD11Q693B1 232 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 CRTC3Q6UUV7 619 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 C4orf22Q6V702 233 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 PPP1R21Q6ZMI0 780 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 KLHDC8BQ8IXV7 354 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 LSMEM2Q8N112 164 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 NAGSQ8N159 534 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 DNAAF3Q8N9W5 541 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms