RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 KCTD3Q9Y597 815 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 PCDHB1Q9Y5F3 818 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ARL5AQ9Y689 179 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 RNF215Q9Y6U7 377 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 CHUKO15111 745 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 NUDT21O43809 227 aaKnown RBP15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ECEL1O95672 775 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 PNLIPP16233 465 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 STIP1P31948 543 aaKnown RBP15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ACTR1BP42025 376 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 PDX1P52945 283 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 MAZP56270 477 aaKnown RBP15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ACTR1AP61163 376 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 LRP8Q14114 963 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 TAF1AQ15573 450 aaPredicted RBP15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 CHRNA6Q15825 494 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ISXQ2M1V0 245 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ARHGEF18Q6ZSZ5 1173 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 PROSER1Q86XN7 944 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 REXO1L1PQ8IX06 675 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 ARL14Q8N4G2 192 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 BRSK1Q8TDC3 778 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 VPS35Q96QK1 796 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 OR2AG1Q9H205 316 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 KCNF1Q9H3M0 494 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 LRIT1Q9P2V4 623 aa15.78■□□□□ 0.12
CTDSP1-209ENST00000488627 WDFY3Q8IZQ1 3526 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 DMXL2Q8TDJ6 3036 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 USP24Q9UPU5 2620 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 A0A1W2PNU3 283 aaPredicted RBP15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 GPR89AB7ZAQ6 455 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 GRID2O43424 1007 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 NRDCO43847 1150 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A9O60656 530 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 PPFIA2O75334 1257 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 CSO75390 466 aaKnown RBP15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 MTX2O75431 263 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 TCEA3O75764 348 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 EML2O95834 649 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 GPR89BP0CG08 455 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A6P19224 532 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A1P22309 533 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A4P22310 534 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A3P35503 534 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A5P35504 534 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 SPAM1P38567 509 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 CCL7P80098 99 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 B4GALNT1Q00973 533 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 P3H1Q32P28 736 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 ZDHHC20Q5W0Z9 365 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNF438Q7Z4V0 828 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 WDR48Q8TAF3 677 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 DEPDC7Q96QD5 511 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 TBL1YQ9BQ87 522 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A7Q9HAW7 530 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A10Q9HAW8 530 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 UGT1A8Q9HAW9 530 aa15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.77■□□□□ 0.12
CTDSP1-209ENST00000488627 RP1P56715 2156 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 A6NCN8 305 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 PRR19A6NJB7 356 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 SRRM3A6NNA2 597 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 PPM1DO15297 605 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 STX7O15400 261 aaKnown RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 GPR39O43194 453 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 B4GAT1O43505 415 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 LPOP22079 712 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 CLCNKAP51800 687 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 NR1D2Q14995 579 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 CCNG2Q16589 344 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 DRICH1Q6PGQ1 229 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 FAM151BQ6UXP7 276 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 RBM44Q6ZP01 1051 aaKnown RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 CHST15Q7LFX5 561 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 PHYKPLQ8IUZ5 450 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF547Q8IVP9 402 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 LRRN3Q9H3W5 708 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 TBC1D29Q9UFV1 150 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 SLC23A2Q9UGH3 650 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 FEZ2Q9UHY8 353 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 PKP3Q9Y446 797 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 ENTPD2Q9Y5L3 495 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 APC2O95996 2303 aa15.76■□□□□ 0.11
CTDSP1-209ENST00000488627 GLYATL1P3A0A0U1RQE8 302 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 C2orf81A6NN90 581 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 LDB2O43679 373 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 VEGFDO43915 354 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 AP2A1O95782 977 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 RPLP0P05388 317 aaKnown RBP15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 ACP5P13686 325 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF140P52738 457 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 XIAPP98170 497 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 TMEM115Q12893 351 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 SNX1Q13596 522 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 PEX6Q13608 980 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 SPRED1Q7Z699 444 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 C11orf96Q7Z7L8 435 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 CCNJLQ8IV13 435 aa15.75■□□□□ 0.11
CTDSP1-209ENST00000488627 SFRP1Q8N474 314 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms