RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MAP10Q9P2G4 905 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 ATP6AP2A0A1C7CYW4 349 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 SYCE1LA8MT33 242 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 H3BMM5 538 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 PIP5K1BO14986 540 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 ATP6AP2O75787 350 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 OR6B1O95007 311 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 LBPP18428 481 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 FMO4P31512 558 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 GK3PQ14409 553 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 NADK2Q4G0N4 442 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 HMBOX1Q6NT76 420 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 CARM1Q86X55 608 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 METTL25Q8N6Q8 603 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 NSMCE3Q96MG7 304 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 CLSTN3Q9BQT9 956 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 C1QTNF3Q9BXJ4 246 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 TRIM15Q9C019 465 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 MUC3BQ9H195 1237 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 SDR39U1Q9NRG7 319 aaPredicted RBP25.94■■□□□ 1.74
HLA-C-208ENST00000487245 TMCO1Q9UM00 188 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 NR1H2P55055 460 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 BNIP2Q12982 314 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 GRIK2Q13002 908 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 LCP2Q13094 533 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 VEPH1Q14D04 833 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 PFKFB4Q16877 469 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 KIF19Q2TAC6 998 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 MAP7D1Q3KQU3 841 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 OGFOD2Q6N063 350 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 LPCAT1Q8NF37 534 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 EXT2Q93063 718 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 STOML2Q9UJZ1 356 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 APPL1Q9UKG1 709 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 RNF112Q9ULX5 631 aa25.93■■□□□ 1.74
HLA-C-208ENST00000487245 SIX3O95343 332 aaPredicted RBP25.92■■□□□ 1.74
HLA-C-208ENST00000487245 GFAPP14136 432 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 TTPAP49638 278 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 PPP4R4Q6NUP7 873 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 LAYNQ6UX15 382 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 ERMP1Q7Z2K6 904 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 PACRGLQ8N7B6 248 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 CCM2LQ9NUG4 571 aaPredicted RBP25.92■■□□□ 1.74
HLA-C-208ENST00000487245 DMTF1Q9Y222 760 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 RNF11Q9Y3C5 154 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 COMMD10Q9Y6G5 202 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 OAS3Q9Y6K5 1087 aaKnown RBP25.92■■□□□ 1.74
HLA-C-208ENST00000487245 TET1Q8NFU7 2136 aa25.92■■□□□ 1.74
HLA-C-208ENST00000487245 ANKRD66B4E2M5 251 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 CLASP2O75122 1294 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 RPS17P08708 135 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SGSHP51688 502 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 MAP7Q14244 749 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 PABPC1LQ4VXU2 614 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SETMARQ53H47 684 aaPredicted RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 AARS2Q5JTZ9 985 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 CXorf57Q6NSI4 855 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 PAQR3Q6TCH7 311 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 RBM44Q6ZP01 1051 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SPATA19Q7Z5L4 167 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SNX31Q8N9S9 440 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SCLYQ96I15 445 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 EXOC2Q96KP1 924 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 PRPF18Q99633 342 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 VN1R3Q9BXE9 311 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 NUSAP1Q9BXS6 441 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 TUBB1Q9H4B7 451 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 GID8Q9NWU2 228 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SNX13Q9Y5W8 968 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 NR5A2O00482 541 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 NME4O00746 187 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 STX16O14662 325 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 KLK8O60259 260 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 TSPAN3O60637 253 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 VPS26AO75436 327 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 MT-CO1P00395 513 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 PRR35P0CG20 571 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 IDO1P14902 403 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 CLCQ05315 142 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 INO80DQ53TQ3 878 aaPredicted RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 MTX3Q5HYI7 312 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 LCN8Q6JVE9 175 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 IYDQ6PHW0 289 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 EFL1Q7Z2Z2 1120 aaKnown RBP25.91■■□□□ 1.74
HLA-C-208ENST00000487245 FBXO39Q8N4B4 442 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 RNF38Q9H0F5 515 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SEMA6AQ9H2E6 1030 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 MUC13Q9H3R2 512 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SLC52A3Q9NQ40 469 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 MED16Q9Y2X0 877 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 YIPF1Q9Y548 306 aa25.91■■□□□ 1.74
HLA-C-208ENST00000487245 SUPT3HB4E1H0 165 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 SUPT3HO75486 399 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 SOD2P04179 222 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 PKMP14618 531 aaKnown RBP25.9■■□□□ 1.74
HLA-C-208ENST00000487245 ETS2P15036 469 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 CAPN3P20807 821 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 ATP6V1B2P21281 511 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 CLCN4P51793 760 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 FOXA1P55317 472 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms