RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TEKT4Q8WW24 435 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 C9orf72Q96LT7 481 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 OGFRQ9NZT2 677 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 CROTQ9UKG9 612 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 PCDHB3Q9Y5E6 796 aa19.22■□□□□ 0.67
SMPDL3A-202ENST00000487215 OR5K4A6NMS3 321 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 MKRN2OSH3BPM6 223 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 MFSD11O43934 449 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 C9P02748 559 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 FURINP09958 794 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 MYBL1P10243 752 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 SPINT3P49223 89 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 MLLT10P55197 1068 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 ERV3-1Q14264 604 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 TCTN3Q6NUS6 607 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 SASS6Q6UVJ0 657 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 C6orf15Q6UXA7 325 aaPredicted RBP19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 LRRC49Q8IUZ0 686 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 PHYKPLQ8IUZ5 450 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 TEX19Q8NA77 164 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 AVL9Q8NBF6 648 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 LPCAT1Q8NF37 534 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 MAML1Q92585 1016 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 TRIM11Q96F44 468 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 PLEKHG4BQ96PX9 1271 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 LYSMD1Q96S90 227 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 PRDM8Q9NQV8 689 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 ANO10Q9NW15 660 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 TTLL3Q9Y4R7 772 aa19.21■□□□□ 0.67
SMPDL3A-202ENST00000487215 USP9YO00507 2555 aaPredicted RBP19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 C1orf232A0A0U1RR37 186 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 GRID2O43424 1007 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 NUAK1O60285 661 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 IL4RP24394 825 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 GARSP41250 739 aaKnown RBP19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 PRKCIP41743 596 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 SH3BP2P78314 561 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 SLC25A11Q02978 314 aaKnown RBP19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 GALNT2Q10471 571 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 MMRN1Q13201 1228 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 CCDC13Q8IYE1 715 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 GALNT6Q8NCL4 622 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 ARRDC2Q8TBH0 407 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 CARD9Q9H257 536 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 FAM83DQ9H4H8 585 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 UCK1Q9HA47 277 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 PCDH9Q9HC56 1237 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 RBM22Q9NW64 420 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 AIPL1Q9NZN9 384 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 POLHQ9Y253 713 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 ADGRG1Q9Y653 693 aa19.2■□□□□ 0.66
SMPDL3A-202ENST00000487215 GOLGA6L22H0YM25 854 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 KRT7P08729 469 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF8P17098 575 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 TYRP1P17643 537 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 CA4P22748 312 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 CES1P23141 567 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF165P49910 485 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 CLCNKAP51800 687 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 RPL26P61254 145 aaKnown RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 PIGHQ14442 188 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 KRT81Q14533 505 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 C4orf17Q53FE4 359 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 TMEM26Q6ZUK4 368 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 ASB18Q6ZVZ8 466 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 TMEM135Q86UB9 458 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 STAMBPL1Q96FJ0 436 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 TGM7Q96PF1 710 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 OR6C1Q96RD1 312 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 OSGEPL1Q9H4B0 414 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 LRRC4CQ9HCJ2 640 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 PKD2L2Q9NZM6 624 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 SCHIP1Q9P0W5 487 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 RCOR3Q9P2K3 495 aaPredicted RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 ATXN10Q9UBB4 475 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 RPL26L1Q9UNX3 145 aaKnown RBP19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 SLC30A1Q9Y6M5 507 aa19.19■□□□□ 0.66
SMPDL3A-202ENST00000487215 MATN3O15232 486 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 KATNA1O75449 491 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 RFPL1O75677 317 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 KIAA0754O94854 1291 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 UBXN7O94888 489 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 NDUFA10O95299 355 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 CD48P09326 243 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 LEPRP48357 1165 aaKnown RBP19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 SEPHS1P49903 392 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 KLHL30Q0D2K2 578 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 STX1AQ16623 288 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF648Q5T619 568 aaPredicted RBP19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 NCBP2-AS2Q69YL0 99 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 TIGD7Q6NT04 549 aaPredicted RBP19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 AOPEPQ8N6M6 819 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 NIPA2Q8N8Q9 360 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 ELMO2Q96JJ3 720 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 ISCUQ9H1K1 167 aa19.18■□□□□ 0.66
SMPDL3A-202ENST00000487215 ZNF768Q9H5H4 540 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms