RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CNGB3Q9NQW8 809 aa4.99□□□□□ -1.61
PRPF38A-203ENST00000487160 OR14J1Q9UGF5 321 aa4.99□□□□□ -1.61
PRPF38A-203ENST00000487160 FBXW11Q9UKB1 542 aa4.99□□□□□ -1.61
PRPF38A-203ENST00000487160 PTGDR2Q9Y5Y4 395 aa4.99□□□□□ -1.61
PRPF38A-203ENST00000487160 FAM169AQ9Y6X4 670 aa4.99□□□□□ -1.61
PRPF38A-203ENST00000487160 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 GLOD5A6NK44 160 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 INAFM1C9JVW0 142 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 MOSPD3O75425 235 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 KCNK5O95279 499 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 ICAM1P05362 532 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 MMP9P14780 707 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 DDX5P17844 614 aaKnown RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 RFX2P48378 723 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 STAT2P52630 851 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 NUDT6P53370 316 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 PNLIPRP2P54317 469 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 RAD23BP54727 409 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 TNFAIP1Q13829 316 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 DLG2Q15700 870 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 TMEM266Q2M3C6 531 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 ZNF805Q5CZA5 627 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 IGSF11Q5DX21 431 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 RARS2Q5T160 578 aaKnown RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 TYW3Q6IPR3 259 aaKnown RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 ZNF280DQ6N043 979 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 ADGRA1Q86SQ6 560 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 FOXRED2Q8IWF2 684 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 SCYL3Q8IZE3 742 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 DSELQ8IZU8 1212 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 APPL2Q8NEU8 664 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 FIZ1Q96SL8 496 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 SH3GL2Q99962 352 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 OSGEPL1Q9H4B0 414 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 SEBOXQ9HB31 216 aaPredicted RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 CPSF2Q9P2I0 782 aaKnown RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 EXO1Q9UQ84 846 aaKnown RBP4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 A2MP01023 1474 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 UGGT1Q9NYU2 1555 aa4.98□□□□□ -1.61
PRPF38A-203ENST00000487160 FMN1Q68DA7 1419 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 PHLPP1O60346 1717 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 CFAP65Q6ZU64 1925 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 MED14O60244 1454 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 COL3A1P02461 1466 aaPredicted RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 B4DGG1 531 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 M0QZ24 198 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 EGFP01133 1207 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 TRIM21P19474 475 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 UBA1P22314 1058 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 STX2P32856 288 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 MSH2P43246 934 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 LMAN1P49257 510 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 MXI1P50539 228 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 PLCD1P51178 756 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 GPR143P51810 404 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 ABATP80404 500 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 ECT2LQ008S8 904 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 ROR2Q01974 943 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 GRSF1Q12849 480 aaKnown RBP eCLIP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 C11orf87Q6NUJ2 197 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 SLC36A4Q6YBV0 504 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 IRF2BP2Q7Z5L9 587 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 ARID3BQ8IVW6 561 aaPredicted RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 TMTC2Q8N394 836 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 SYT2Q8N9I0 419 aaPredicted RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 AVL9Q8NBF6 648 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 NEXN-AS1Q8NBZ9 246 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 TRPC4APQ8TEL6 797 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 APBB2Q92870 758 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 MOAP1Q96BY2 351 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 GRAMD2BQ96HH9 432 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 NUDCD1Q96RS6 583 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 KXD1Q9BQD3 176 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 KIFC3Q9BVG8 833 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 FAM234AQ9H0X4 552 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 EPB41L5Q9HCM4 733 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 FZD10Q9ULW2 581 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 PLAGL1Q9UM63 463 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 UBR1Q8IWV7 1749 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 KDM5DQ9BY66 1539 aa4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 NPHP4O75161 1426 aaPredicted RBP4.97□□□□□ -1.61
PRPF38A-203ENST00000487160 ARHGAP35Q9NRY4 1499 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 hCG_1809904A0A1W2PP81 198 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 A0A1W2PPE2 198 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 A0A1W2PR64 198 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 OR6C75A6NL08 312 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 DKC1O60832 514 aaKnown RBP eCLIP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 AVILO75366 819 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 CSPG5O95196 566 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 NR4A2P43354 598 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 MMP14P50281 582 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 TMF1P82094 1093 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 SREBF2Q12772 1141 aa4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 AIMP1Q12904 312 aaKnown RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 C15orf59Q2T9L4 293 aaPredicted RBP4.96□□□□□ -1.62
PRPF38A-203ENST00000487160 LEXMQ3ZCV2 418 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms