RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 SNRNP27Q8WVK2 155 aaKnown RBP14.28□□□□□ -0.12
CLDN11-207ENST00000486975 PATE1Q8WXA2 126 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLDN11-207ENST00000486975 B3GNT4Q9C0J1 378 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 RBSNQ9H1K0 784 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 CARD9Q9H257 536 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 FAM153AQ9UHL3 310 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 ATXN7L1Q9ULK2 861 aaPredicted RBP14.28□□□□□ -0.12
CLDN11-207ENST00000486975 PLEKHM1Q9Y4G2 1056 aa14.28□□□□□ -0.12
CLDN11-207ENST00000486975 TEX51A0A1B0GUA7 166 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 LOC285095A0A1B0GVY8 99 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 NUAK1O60285 661 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 APOC2P02655 101 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 ATP1A1P05023 1023 aaKnown RBP14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PTPN7P35236 360 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 XRCC4Q13426 336 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PCSK7Q16549 785 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 MAP9Q49MG5 647 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 ZNF569Q5MCW4 686 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 FOXR1Q6PIV2 292 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 KDELC1Q6UW63 502 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 GPR155Q7Z3F1 870 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 TMPRSS9Q7Z410 1059 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 DAAM2Q86T65 1068 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PIM3Q86V86 326 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 CCDC50Q8IVM0 306 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 SFRP1Q8N474 314 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 LSM14AQ8ND56 463 aaKnown RBP14.27□□□□□ -0.13
CLDN11-207ENST00000486975 DTX3LQ8TDB6 740 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 HTR3CQ8WXA8 447 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 KRT35Q92764 455 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PLEKHG4BQ96PX9 1271 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 FCRL5Q96RD9 977 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 CMKLR1Q99788 373 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 DPYSL5Q9BPU6 564 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 GPR63Q9BZJ6 419 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 TRABDQ9H4I3 376 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 TRHDEQ9UKU6 1024 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 TFR2Q9UP52 801 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 LOXL2Q9Y4K0 774 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 PCYT1BQ9Y5K3 369 aaPredicted RBP14.27□□□□□ -0.13
CLDN11-207ENST00000486975 ADGRG1Q9Y653 693 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 NBEAQ8NFP9 2946 aa14.27□□□□□ -0.13
CLDN11-207ENST00000486975 UNC13CQ8NB66 2214 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 KIF26BQ2KJY2 2108 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 A6NCN8 305 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 PPM1DO15297 605 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 NVLO15381 856 aaKnown RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 KLK10O43240 276 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 PMPCBO75439 489 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 PIRTP0C851 137 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 JMJD7P0C870 316 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 NFKB1P19838 968 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 CD1CP29017 333 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 ALDH4A1P30038 563 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 HMGCLP35914 325 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 CLCNKAP51800 687 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 OR1D5P58170 312 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 GPLD1P80108 840 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 BIRC2Q13490 618 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 B4GALNT4Q76KP1 1039 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 KDELC2Q7Z4H8 507 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 ZC3H18Q86VM9 953 aaKnown RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 ZNF567Q8N184 647 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 SLC37A2Q8TED4 501 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 GLYATL1Q969I3 302 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 NAF1Q96HR8 494 aaKnown RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 BBC3Q96PG8 261 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 HERPUD2Q9BSE4 406 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 SPATA16Q9BXB7 569 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 HACD3Q9P035 362 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 KLHL8Q9P2G9 620 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-207ENST00000486975 ZNHIT2Q9UHR6 403 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 SPO11Q9Y5K1 396 aa14.26□□□□□ -0.13
CLDN11-207ENST00000486975 AHCTF1Q8WYP5 2266 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 IGHV1OR21-1A0A087WYE8 117 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 CCDC66A2RUB6 948 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 RCCD1A6NED2 376 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 CHUKO15111 745 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 PJA2O43164 708 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 GRID2O43424 1007 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 SLC2A4P14672 509 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 BPIP17213 487 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 HLA-DPA1P20036 260 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 CTNNA2P26232 953 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 SLC5A2P31639 672 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 WNT3AP56704 352 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 CLN3Q13286 438 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 MPP3Q13368 585 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 NOMO1Q15155 1222 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
CLDN11-207ENST00000486975 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms