RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 HNRNPLLQ8WVV9 542 aaKnown RBP12.77□□□□□ -0.37
CHMP3-208ENST00000486404 FGF11Q92914 225 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 SCARF2Q96GP6 870 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-208ENST00000486404 MRGPRX2Q96LB1 330 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-208ENST00000486404 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 PPP1R2P1Q96PQ5 205 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 WDR24Q96S15 920 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 FICDQ9BVA6 458 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 FOXP3Q9BZS1 431 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 OR2AG1Q9H205 316 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 C10orf88Q9H8K7 445 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 APPL1Q9UKG1 709 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 PKP3Q9Y446 797 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 PLEKHM1Q9Y4G2 1056 aa12.77□□□□□ -0.37
CHMP3-208ENST00000486404 CHD6Q8TD26 2715 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 LOC285095A0A1B0GVY8 99 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 GPR89AB7ZAQ6 455 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 GRID2O43424 1007 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 KRT86O43790 486 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 DNAJC6O75061 913 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 EPOP01588 193 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 GPR89BP0CG08 455 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 BPIP17213 487 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 PSMB4P28070 264 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ALDH4A1P30038 563 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 SPAM1P38567 509 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 CHRNA4P43681 627 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 CCDC173Q0VFZ6 552 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 EIF3IQ13347 325 aaKnown RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 INSCQ1MX18 579 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 COL28A1Q2UY09 1125 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 PLA2G4EQ3MJ16 856 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ZDHHC20Q5W0Z9 365 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 CRTC3Q6UUV7 619 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ARHGEF18Q6ZSZ5 1173 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ARL14Q8N4G2 192 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 PATE1Q8WXA2 126 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 GLYATL1Q969I3 302 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 EID2BQ96D98 161 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 LIN37Q96GY3 246 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ALS2CR12Q96Q35 445 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ZCCHC2Q9C0B9 1178 aaKnown RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 CARD9Q9H257 536 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 OSGEPL1Q9H4B0 414 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 BPIFA1Q9NP55 256 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 ATXN7L1Q9ULK2 861 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 GUCA1BQ9UMX6 200 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 KCNK6Q9Y257 313 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 AAR2Q9Y312 384 aaKnown RBP12.76□□□□□ -0.37
CHMP3-208ENST00000486404 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
CHMP3-208ENST00000486404 A0A087WV48 116 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 AURKAO14965 403 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 CASC3O15234 703 aaKnown RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ARHGAP6O43182 974 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 NUAK1O60285 661 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 SNX2O60749 519 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 DXOO77932 396 aaKnown RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 HMGCLP35914 325 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ANKRD20A3Q5VUR7 823 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 FAM151BQ6UXP7 276 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF438Q7Z4V0 828 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 NAGSQ8N159 534 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 RNF10Q8N5U6 811 aaKnown RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF248Q8NDW4 579 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 SLC37A2Q8TED4 501 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 KCNK4Q9NYG8 393 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 AKAP7Q9P0M2 348 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ATXN10Q9UBB4 475 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 CNOT6Q9ULM6 557 aaKnown RBP12.75□□□□□ -0.37
CHMP3-208ENST00000486404 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
CHMP3-208ENST00000486404 GLYATL1P3A0A0U1RQE8 302 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 PLD2O14939 933 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 STX7O15400 261 aaKnown RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 PPFIA2O75334 1257 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 CPNE6O95741 557 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 JMJD7P0C870 316 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF8P17098 575 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 CCKBRP32239 447 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 OR1D5P58170 312 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF648Q5T619 568 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms