RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TAAR2Q9P1P5 351 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 LRIT1Q9P2V4 623 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 ACSL6Q9UKU0 697 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 AMFRQ9UKV5 643 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TFR2Q9UP52 801 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 ST14Q9Y5Y6 855 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 DNMT3AQ9Y6K1 912 aaPredicted RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 SCN8AQ9UQD0 1980 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CCDC187A0A096LP49 1063 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 A0A0U1RQS6 177 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 C5orf60A6NFR6 353 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PRR19A6NJB7 356 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CDRT15L2A8MXV6 281 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 RRP8O43159 456 aaKnown RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 B4GAT1O43505 415 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 TLX3O43711 291 aaPredicted RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 VEGFDO43915 354 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 BRINP1O60477 761 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PYGMP11217 842 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 TNNT1P13805 278 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 HLA-DPA1P20036 260 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 RBL1P28749 1068 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 STIP1P31948 543 aaKnown RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 POLD2P49005 469 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 WNT3AP56704 352 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CLDN6P56747 220 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 GSDMDP57764 484 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CCL7P80098 99 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 TRA2AQ13595 282 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS50-218ENST00000485994 SPIDRQ14159 915 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 SLC1A5Q15758 541 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ITPRIPL1Q6GPH6 555 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 IYDQ6PHW0 289 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 WASH2PQ6VEQ5 465 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 LRRC69Q6ZNQ3 347 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 LYSMD3Q7Z3D4 306 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ZC3H18Q86VM9 953 aaKnown RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 SFRP1Q8N474 314 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ARL14Q8N4G2 192 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 UBL4BQ8N7F7 174 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 AVL9Q8NBF6 648 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 KYQ8NBH2 561 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 LSM14AQ8ND56 463 aaKnown RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 SPATA22Q8NHS9 363 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ACTL9Q8TC94 416 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 BRSK1Q8TDC3 778 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ZDHHC1Q8WTX9 485 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ALG3Q92685 438 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CCDC97Q96F63 343 aaPredicted RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 OR2M4Q96R27 311 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 DPH1Q9BZG8 443 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 GPR63Q9BZJ6 419 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 GOLPH3Q9H4A6 298 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 ASCL3Q9NQ33 180 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 WASH6PQ9NQA3 447 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 IL17CQ9P0M4 197 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 SEPT10Q9P0V9 454 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PDP2Q9P2J9 529 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 CD84Q9UIB8 345 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 MOSPD1Q9UJG1 213 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 RAXQ9Y2V3 346 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 TMEM98Q9Y2Y6 226 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 AAR2Q9Y312 384 aaKnown RBP6.94□□□□□ -1.3
VPS50-218ENST00000485994 TTLL3Q9Y4R7 772 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PCDHB1Q9Y5F3 818 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 PIKFYVEQ9Y2I7 2098 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 NBEAQ8NFP9 2946 aa6.94□□□□□ -1.3
VPS50-218ENST00000485994 KIR2DS5A0A0G2JLQ3 304 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 A0A0G2JNG1 304 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 A0A1W2PNU3 283 aaPredicted RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 GRID2IPA4D2P6 1211 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 KLHL33A6NCF5 533 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 AGAP14A8MT82 685 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 FADS2P1A8MWK0 482 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 GOLGA6L6A8MZA4 724 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 D6RAR5 112 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 H7C0C1 242 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 KIR2DS3K7RE56 304 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 PPM1DO15297 605 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 NVLO15381 856 aaKnown RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 DDX3YO15523 660 aaKnown RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 GRID2O43424 1007 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 PMPCBO75439 489 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 SLC25A14O95258 325 aaPredicted RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 ECEL1O95672 775 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 RBP3P10745 1247 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 SLC2A4P14672 509 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 BPIP17213 487 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 XRCC1P18887 633 aaPredicted RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 NFKB1P19838 968 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 AK4P27144 223 aaPredicted RBP6.93□□□□□ -1.3
VPS50-218ENST00000485994 CD1CP29017 333 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 ADRA1AP35348 466 aa6.93□□□□□ -1.3
VPS50-218ENST00000485994 GNPDA1P46926 289 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms