RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 FAM83DQ9H4H8 585 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 RMI1Q9H9A7 625 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 VPS18Q9P253 973 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 IL17BQ9UHF5 180 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 ST14Q9Y5Y6 855 aa13.14□□□□□ -0.31
UBA3-210ENST00000485424 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
UBA3-210ENST00000485424 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
UBA3-210ENST00000485424 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 KCNK1O00180 336 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SNX2O60749 519 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 CCL4P13236 92 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ACP5P13686 325 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ZFXP17010 805 aaPredicted RBP13.13□□□□□ -0.31
UBA3-210ENST00000485424 MPSTP25325 297 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 MAPK9P45984 424 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SPINT3P49223 89 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ARSDP51689 593 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 HHEXQ03014 270 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
UBA3-210ENST00000485424 NIPAL4Q0D2K0 466 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 GALNT3Q14435 633 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 PDK1Q15118 436 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SNAP47Q5SQN1 464 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 TMEM71Q6P5X7 295 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
UBA3-210ENST00000485424 CPNE8Q86YQ8 564 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 PHYKPLQ8IUZ5 450 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 ARRDC2Q8TBH0 407 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SLC37A2Q8TED4 501 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 COX14Q96I36 57 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SPATA16Q9BXB7 569 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 SLC39A1Q9NY26 324 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 KCNK6Q9Y257 313 aa13.13□□□□□ -0.31
UBA3-210ENST00000485424 RGSL1A5PLK6 1076 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 EFCAB7A8K855 629 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 A8MU76 341 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 SUV39H1O43463 412 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 MTA2O94776 668 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 SLC25A14O95258 325 aaPredicted RBP13.12□□□□□ -0.31
UBA3-210ENST00000485424 KRT1P04264 644 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 SFTPCP11686 197 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 TNNT1P13805 278 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 HNRNPH3P31942 346 aaKnown RBP13.12□□□□□ -0.31
UBA3-210ENST00000485424 CSF2RBP32927 897 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 ARHGAP25P42331 645 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 FASLGP48023 281 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 RAB15P59190 212 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 NFATC2Q13469 925 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 PCSK7Q16549 785 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 QPCTQ16769 361 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 ZNF569Q5MCW4 686 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 DCAF12Q5T6F0 453 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 HENMT1Q5T8I9 393 aaKnown RBP13.12□□□□□ -0.31
UBA3-210ENST00000485424 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 ATG14Q6ZNE5 492 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 PQLC3Q8N755 202 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 AVL9Q8NBF6 648 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
UBA3-210ENST00000485424 RAPGEF5Q92565 580 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 ART4Q93070 314 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 HERPUD2Q9BSE4 406 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.12□□□□□ -0.31
UBA3-210ENST00000485424 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 GPR63Q9BZJ6 419 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
UBA3-210ENST00000485424 TEX15Q9BXT5 2789 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 RP1L1Q8IWN7 2480 aaPredicted RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 OR5K4A6NMS3 321 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 GRID2O43424 1007 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 DNAJC6O75061 913 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 PPFIA2O75334 1257 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 PRLP01236 227 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 THRAP10827 490 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 FGF3P11487 239 aaPredicted RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 DYNLT1P63172 113 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 IFI35P80217 286 aaPredicted RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 INSCQ1MX18 579 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 LYSMD3Q7Z3D4 306 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 TRIM48Q8IWZ4 208 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 SFRP1Q8N474 314 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 NCSTNQ92542 709 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms