RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 DSC2Q02487 901 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 NIPAL4Q0D2K0 466 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SEMA5AQ13591 1074 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 DPYSL2Q16555 572 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SMTNL2Q2TAL5 461 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 FAM199XQ6PEV8 388 aaPredicted RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 USP45Q70EL2 814 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 PLXDC1Q8IUK5 500 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 PSTKQ8IV42 348 aaKnown RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 ARRDC2Q8TBH0 407 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 CSPG4P5Q96PW8 444 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 MLXIPLQ9NP71 852 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 VPS18Q9P253 973 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 ATXN10Q9UBB4 475 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 POLHQ9Y253 713 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 PCDHB3Q9Y5E6 796 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 KIR2DS5A0A0G2JLQ3 304 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 A0A0G2JNG1 304 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 PIPSLA2A3N6 862 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 LILRA5A6NI73 299 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 KIR2DS3K7RE56 304 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 PRPSAP2O60256 369 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 NUAK1O60285 661 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 VPS4BO75351 444 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RFPL1O75677 317 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 SORBS2O94875 1100 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 NDUFA10O95299 355 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 CLDN1O95832 211 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RECKO95980 971 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RARAP10276 462 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 MAN1A1P33908 653 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 PPP1CAP62136 330 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 CHAF1BQ13112 559 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 KIR2DS5Q14953 304 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 HENMT1Q5T8I9 393 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 CPZQ66K79 652 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBR4-213ENST00000483922 Q8NA96 180 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 NEK11Q8NG66 645 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RSC1A1Q92681 617 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 ZNF768Q9H5H4 540 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 UCK1Q9HA47 277 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 RCOR3Q9P2K3 495 aaPredicted RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 CNOT8Q9UFF9 292 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 LIMA1Q9UHB6 759 aaKnown RBP12.71□□□□□ -0.37
UBR4-213ENST00000483922 VPS4AQ9UN37 437 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 CACNA1DQ01668 2161 aa12.71□□□□□ -0.37
UBR4-213ENST00000483922 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 WIPF3A6NGB9 483 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 LRRC10BA6NIK2 292 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 GRID2O43424 1007 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 RNF8O76064 485 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 UBXN7O94888 489 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 ZNF30P17039 623 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 SPINT3P49223 89 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 CLCNKAP51800 687 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 DNASE1L3Q13609 305 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 IL11RAQ14626 422 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 CT47A1Q5JQC4 288 aaPredicted RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 ALG1LQ6GMV1 187 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 PWWP2BQ6NUJ5 590 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 TMCO3Q6UWJ1 677 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 TMEM26Q6ZUK4 368 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 MAML1Q92585 1016 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 HERPUD2Q9BSE4 406 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 TDRD1Q9BXT4 1180 aaKnown RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
UBR4-213ENST00000483922 EPB41L1Q9H4G0 881 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 ZWILCHQ9H900 591 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 PCDH18Q9HCL0 1135 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 LHX9Q9NQ69 397 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 KLC4Q9NSK0 619 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 TMPRSS11EQ9UL52 423 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 PADI1Q9ULC6 663 aa12.7□□□□□ -0.38
UBR4-213ENST00000483922 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
UBR4-213ENST00000483922 ABCA12Q86UK0 2595 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms