RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 DPPA4Q7L190 304 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 LMNTD2Q8IXW0 634 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 OR4L1Q8NH43 312 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 SLC7A6OSQ96CW6 309 aaPredicted RBP17.07■□□□□ 0.32
MRPL28-210ENST00000483764 BTBD10Q9BSF8 475 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 MKRN2Q9H000 416 aaKnown RBP17.07■□□□□ 0.32
MRPL28-210ENST00000483764 LMAN1LQ9HAT1 526 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 CD248Q9HCU0 757 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 NOP53Q9NZM5 478 aaKnown RBP17.07■□□□□ 0.32
MRPL28-210ENST00000483764 FKBPLQ9UIM3 349 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 MMP17Q9ULZ9 603 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 PSAT1Q9Y617 370 aa17.07■□□□□ 0.32
MRPL28-210ENST00000483764 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 PLK4O00444 970 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TPP1O14773 563 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 AREL1O15033 823 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 ALDOAP04075 364 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 MYL2P10916 166 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 MMP12P39900 470 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 P2RY2P41231 377 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 GTF2A1P52655 376 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 ELP6Q0PNE2 266 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 LRRC32Q14392 662 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 FASTKD1Q53R41 847 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 ZNF470Q6ECI4 717 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 AFTPHQ6ULP2 937 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 STRA8Q7Z7C7 330 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 CACUL1Q86Y37 369 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TMPRSS6Q8IU80 811 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 SIX5Q8N196 739 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 CBARPQ8N350 705 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 RAB7BQ96AH8 199 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TSNARE1Q96NA8 513 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 NELL2Q99435 816 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TBC1D10AQ9BXI6 508 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 HAO1Q9UJM8 370 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 COL6A3P12111 3177 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 KANSL1LA0AUZ9 987 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 TMEM114B3SHH9 223 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 CD3EAPO15446 510 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 BPIP17213 487 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 MC4RP32245 332 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 DRD3P35462 400 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 STC1P52823 247 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 PTPN5P54829 565 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 ASPHQ12797 758 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 RALGDSQ12967 914 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 CTBP1Q13363 440 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 N4BP2L1Q5TBK1 243 aaPredicted RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 AADATQ8N5Z0 425 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 GPR150Q8NGU9 434 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 PIWIL2Q8TC59 973 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 PTCD3Q96EY7 689 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 LTB4R2Q9NPC1 389 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 FBXO5Q9UKT4 447 aa17.06■□□□□ 0.32
MRPL28-210ENST00000483764 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 FNDC3AQ9Y2H6 1198 aaKnown RBP17.06■□□□□ 0.32
MRPL28-210ENST00000483764 FAM170BA6NMN3 283 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 SPINT1O43278 529 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 KLHL2O95198 593 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 DNTTP04053 509 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 PROCP04070 461 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 SERPINA6P08185 405 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 C1SP09871 688 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 ESRRAP11474 423 aaPredicted RBP17.05■□□□□ 0.32
MRPL28-210ENST00000483764 SLC1A2P43004 574 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 CCNG1P51959 295 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 KPNA2P52292 529 aaKnown RBP17.05■□□□□ 0.32
MRPL28-210ENST00000483764 XIAPP98170 497 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 OVGP1Q12889 678 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 PEX6Q13608 980 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 CRY1Q16526 586 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 PIP5KL1Q5T9C9 394 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 TMEM92Q6UXU6 159 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 Q6ZS52 159 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 KIAA0408Q6ZU52 694 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 HSD11B1LQ7Z5J1 315 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 SDCCAG8Q86SQ7 713 aaPredicted RBP17.05■□□□□ 0.32
MRPL28-210ENST00000483764 GJD3Q8N144 294 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 HDDC3Q8N4P3 179 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 C2CD4AQ8NCU7 369 aaPredicted RBP17.05■□□□□ 0.32
MRPL28-210ENST00000483764 EBF2Q9HAK2 575 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 IL26Q9NPH9 171 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 PKD2L2Q9NZM6 624 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
MRPL28-210ENST00000483764 APPL1Q9UKG1 709 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 ITM2BQ9Y287 266 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 STK38LQ9Y2H1 464 aa17.05■□□□□ 0.32
MRPL28-210ENST00000483764 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
MRPL28-210ENST00000483764 H0Y858 1186 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms