RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 HES3Q5TGS1 186 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 ADGRG6Q86SQ4 1221 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 LINC00523Q86TU6 105 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 DCBLD1Q8N8Z6 715 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 PRELID2Q8N945 189 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 CCDC89Q8N998 374 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 GLIS1Q8NBF1 620 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 ETNK1Q9HBU6 452 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 SPATS2LQ9NUQ6 558 aaKnown RBP17.82■□□□□ 0.44
HDAC6-225ENST00000483506 TRMT1Q9NXH9 659 aaKnown RBP17.82■□□□□ 0.44
HDAC6-225ENST00000483506 PAK5Q9P286 719 aa17.82■□□□□ 0.44
HDAC6-225ENST00000483506 GLYATL1P3A0A0U1RQE8 302 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 CPED1A4D0V7 1026 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 CES2O00748 559 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 LDB2O43679 373 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 VEGFDO43915 354 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF8P17098 575 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-225ENST00000483506 CAMK2BQ13554 666 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 ITGA9Q13797 1035 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 HLTFQ14527 1009 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC6-225ENST00000483506 C14orf28Q4W4Y0 310 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 PERM1Q5SV97 790 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 CERCAMQ5T4B2 595 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 C4orf22Q6V702 233 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 MARK2Q7KZI7 788 aaKnown RBP17.81■□□□□ 0.44
HDAC6-225ENST00000483506 OR4K2Q8NGD2 314 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 SIRPGQ9P1W8 387 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 GULP1Q9UBP9 304 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 PLEKHM1Q9Y4G2 1056 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 GPSM3Q9Y4H4 160 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 MAP1BP46821 2468 aaKnown RBP17.81■□□□□ 0.44
HDAC6-225ENST00000483506 WDFY3Q8IZQ1 3526 aa17.81■□□□□ 0.44
HDAC6-225ENST00000483506 USP27XA6NNY8 438 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 BUD23O43709 281 aaKnown RBP17.8■□□□□ 0.44
HDAC6-225ENST00000483506 ETS1P14921 441 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 PNLIPP16233 465 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 GLB1P16278 677 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 PSMA3P25788 255 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CLCNKAP51800 687 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CHRNA6Q15825 494 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CYP1B1Q16678 543 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 KHDC1Q4VXA5 237 aaKnown RBP17.8■□□□□ 0.44
HDAC6-225ENST00000483506 SLC30A9Q6PML9 568 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 FAM151BQ6UXP7 276 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 UNQ6494/PRO21346Q6UXR6 183 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 DDHD1Q8NEL9 900 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 WDR48Q8TAF3 677 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 MAPK15Q8TD08 544 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CNTNAP3BQ96NU0 1288 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 OSBPL9Q96SU4 736 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CNTNAP3Q9BZ76 1288 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 DPEP2Q9H4A9 486 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 SUDS3Q9H7L9 328 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-225ENST00000483506 ZNHIT2Q9UHR6 403 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 APPL1Q9UKG1 709 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 CLCA2Q9UQC9 943 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 KCTD3Q9Y597 815 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 EPG5Q9HCE0 2579 aa17.8■□□□□ 0.44
HDAC6-225ENST00000483506 FREM2Q5SZK8 3169 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 PRR19A6NJB7 356 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 AGAP14A8MT82 685 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 B4DGG1 531 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 GRID2O43424 1007 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 NUDT21O43809 227 aaKnown RBP17.79■□□□□ 0.44
HDAC6-225ENST00000483506 TCEA3O75764 348 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 PRAMEF1O95521 474 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 MT-CO3P00414 261 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 RPL22P35268 128 aaKnown RBP17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ACTR1BP42025 376 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 CLDN6P56747 220 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ACTR1AP61163 376 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 XIAPP98170 497 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 CCDC173Q0VFZ6 552 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 CDH17Q12864 832 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 PTPRCAPQ14761 206 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 LDLRAP1Q5SW96 308 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF648Q5T619 568 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF438Q7Z4V0 828 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 PRUNE1Q86TP1 453 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 SFTPA2Q8IWL1 248 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 NAGSQ8N159 534 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ACTRT1Q8TDG2 376 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ZDHHC1Q8WTX9 485 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 CCDC3Q9BQI4 270 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 EIF2B3Q9NR50 452 aaKnown RBP17.79■□□□□ 0.44
HDAC6-225ENST00000483506 RAB6BQ9NRW1 208 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 PYCARDQ9ULZ3 195 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 SNX12Q9UMY4 172 aa17.79■□□□□ 0.44
HDAC6-225ENST00000483506 FAM149AA5PLN7 773 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 A6NCN8 305 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 TMEM8BA6NDV4 472 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 MROH6A6NGR9 719 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 H7C0S8 307 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
HDAC6-225ENST00000483506 NTN3O00634 580 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-225ENST00000483506 CAPNS1P04632 268 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 ZSCAN5DPP0CG00 497 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms